BIS 103: Krebs Flashcards

1
Q

I - Reactants

A

oaa, acetyl CoA, H20

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2
Q

II - Reactants

A

L- citrate,

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3
Q

III - Reactants

A

isocitrate, NAD+, Mg+

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4
Q

IV - Reactants

A

a-kg, NAD+, CoA-SH

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5
Q

V - Reactants

A

succinyl-CoA, GDP, Pi

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6
Q

VI - Reactants

A

succinate, FAD

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7
Q

VII - Reactants

A

trans-fumarate, h20

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8
Q

VIII - Reactants

A

L-malate, NAD+

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9
Q

I - Products

A

L-citrate, CoA

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10
Q

II - Products

A

isocitrate

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11
Q

III - Products

A

a-kg, NADH, CO2

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12
Q

IV - Products

A

succinyl-CoA, CO2, NADH

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13
Q

V - Products

A

succinate, GTP, CoASH

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14
Q

VI - Products

A

trans-fumarate, FADH2

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15
Q

VII - Products

A

L-malate

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16
Q

VII - - Products

A

oaa, NADH

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17
Q

I - Enzymes

A

citrate synTHAse

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18
Q

II - Enzymes

A

aconitase - 4Fe:4S

19
Q

III - Enzymes

A

isocitrate dehyrongenase

20
Q

IV - Enzymes

A

a-kg dehydrogenase complex

21
Q

V- - Enzymes

A

succinyl-CoA synthase

22
Q

VI - - Enzymes

A

succinate dehygrogenase

23
Q

VII - Enzymes

A

fumarase

24
Q

VIII - Enzymes

A

malate dehydrogenase

25
Q

I - Mechanism

A
  1. oaa binding induces site for CoA so h20 doesnt attack first
  2. CH2-acCoA attacks C=O -> CO2
  3. h20 attacks C=O -> CoA-SH
26
Q

II - goal

A

so you can make a ketone

27
Q

II Mecanism

A
  1. 3 point attachment
  2. Fe takes e- density of -OH - more positive
  3. enables his H- attack - > db
  4. add water to db
28
Q

III - Mechanism

A
  1. MG2+ takes electron density from bottom
  2. NAD+ takes bottom H -> db, CO2 leaves
  3. keto-enol taut
29
Q

III - significance of mech

A

co2 leaves, keto-enol taut -> very 1D

30
Q

IV - mech

A

E1- TPP attack at keto C=O - CO2 leaves
E2 - CoAsh attacks C=O
E3- FAD->NADH

31
Q

V- mech

A

P)-O- attacks O=C-S-CoA
his: attacks O=C-P -> CoA-SH, suc
GDP attacks his: -P

32
Q

V - mech significance

A

reversible - = E

33
Q

what interchanges GTP and ATP?

A

nucleoside diphosphate kinase

34
Q

ATP/NADH - how much ATP from krebs?

A

2.5 ->7.5

35
Q

ATP/FADH2 - how much ATP from krebs?

A

1.5 -> 1.5

36
Q

how much ATP from krebs (overall)?

A

10

37
Q

oxaloacetate

A

O=C –CO2-

CH2-CO2-

38
Q

Citrate

A

CH2-CO2-
HOC –CO2-
CH2-CO2-

39
Q

Isocitrate

A

CH2-CO2-
H C –CO2-
HO CH-CO2-

40
Q

A-KETOGLUTARATE

A

CH2-CO2-
H C H
O=C -CO2-

41
Q

SUCCINYL-CoA

A

CH2-CO2-
H C H
O=C -SCoA

42
Q

SUCCINATE

A

CH2-CO2-
H C H
O=C -O-

43
Q

FUMARATE

A

CH-CO2-
||
H C
O=C -O-

44
Q

MALATE

A

CH-CO2-
|
HOC
O=C -O-