biological molecules long answer questions Flashcards

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1
Q

Describe how the structures of starch and glycogen are related to their functions (5marks)

A

Starch

  • Helical so compact
  • Insoluble so doesn’t affect water potential of plant cell
  • Slightly branched for easy release of glucose for respiration
  • Large molecule so cannot leave cell

Glycogen

  • Compact granules
  • Highly branched for quick release of glucose
  • In animal cells which have higher respiration rates
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2
Q

How is the structures of cellulose related to its function (6 marks)

A

Cellulose is a POLYMER of beta glucose MONOMERS

polymers cross-linked by many hydrogen bonds

forms microfibrils

These are strong

Support plant cells and prevents bursting

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3
Q

Compare and contrast the structure and properties of starch and cellulose (5 marks)

A

BOTH are polysaccharides

STARCH is made of ALPHA GLUCOSE monomers whereas cellulose is made of BETA GLUCOSE monomers

in BOTH the monomers are linked by glycosidic bonds

In starch the polymers are slightly branched in contrast the polymers in cellulose are unbranched

BOTH are insoluble

In cellulose polymers are cross=linked by H bonds to form fibrils whereas in starch microfibrils do not form

Cellulose is a very strong molecule whereas starch is now strong

Starch is helical making it compact, cellulose isnt compact

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4
Q

The structure and functions of Phospholipids (7 marks)

A

Phospholipids made up of glycerol covalently bonded to 2 fatty acids and a phosphate group

Fatty acids are hydrophobic
Phosphate group is hydrophilic

Phospholipids main component of cell membranes

Phospholipids form a bilayer

Fatty acids face towards centre of membrane

Membrane PARTIALLY PERMEABLE

Membrane is a barrier to charged particles

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5
Q

Compare and contrast the structure and properties of triglycerides and phospholipids (5 marks)

A

Both contain ester bonds

Both contain glycerol

Fatty acids on both may be saturated or unsaturated

Both are insoluble in water

Both contain C, H, O but phospholipids also have P

Triglycerides have 3 fatty acides whereas phsopholipids have 2 fatty acids and a phosphate group

Triglycerides are hydrophobic in contrast phospholipids have hydrophilic and hydrophobic regions

Phospholipids form bilayers in water whereas triglycerides don’t

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6
Q

Describe chemical tests you could use to confirm the presence of lipids, non reducing sugars and amylase in a sample (5 marks)

A

Lipid

Add ethanol THEN add water AND mix
positive result is a white/milky EMULSION

Non-reducing Sugar

Do benedict’s test and get a negative result

BOIL with acid THEN neutralise with alkali

Heat w/ benedict’s and red/orange colour change is positive result

Amylase

Add biuret reagent and changes to purple
Add starch and test for reducing sugar

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7
Q

Describe the chemical reactions in the conversion of polymers to monomers and monomers to polymers. 2 named examples (5 marks)

A

A condensation reaction joins monomers together and forms a (chemical) bond and releases water

A hydrolysis reaction breaks a chemical bond between monomers and uses water

e.g Maltose is made of 2 alpha glucose monomers which are joined together by a glycosidic bond

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8
Q

Describe the induced fit mechanism of enzyme activity (5 marks)

A

Substrate and active site are not precisely complementary

Substrate induces shape change in active site of enzyme

Enzyme moulds itself around the substrate as the Enzyme substrate complex formed

Altered active site places a STRAIN on bonds in substrate

Lowering activation energy

Reaction takes place, product released

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9
Q

Use your knowledge of enzymes to compare and contrast the lock and key and induced fit models of enzyme activity (5 marks)

A

Both involve formation of ESCs

Both reduce activation energy

L&K substrate is complementary to active, IF substrate not complementary

IF active site changes shape to mould around substrate, this doesn’t happen in L&K

IF strain on bonds in enzyme and substrate, this doesnt happen in L&K

LK enzyme rigid whereas IF enzyme flexible

In both enzyme in not used up

In both enzyme is specific

In both enzyme can be affected by temp and pH

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10
Q

Compare and contrast competitive and non-competitive inhibitors (5 marks)

A

CI are a similar shape to the substrate whereas NCI are not

CI complementary to active site whereas NCI are not

CI bind to active site of enzyme in contrast NCI bind to enzyme outside of active site

With NCI the active site changes shape which does not happen with CI

Both prevent formation of ESCs

With CI the reaction rate increases if more substrate is added, this does not happen with NCI

Both reduce rate of reaction

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11
Q

How is the structure of DNA adapted to its function (5 marks)

A

It is able to carry the genetic code in its base sequence

Helical so it is compact

A large molecule which can carry a large amount of information

The sugar phosphate backbone is strong and stable due to strong covalent phosphodiester bonds

Many weak hydrogen bonds between the paired bases make the molecule strong and stable

The genetic code is protected inside the helix

The weak H bonds allow the two strands to separate during semi-conservative replication

Complementary base pairing allows precise replication

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12
Q

Compare and contrast the structures and functions of DNA and RNA (5 marks)

A

Both are composed of polymers of monomers called nucleotides

In both the nucleotides are joined together by phosphodiester bonds

Both contain the nitrogenous bases Adenine, Guanine and Cytosine

DNA nucleotides contain the base Thymine in contrast RNA nucleotides contain the base Uracil

DNA is double stranded whereas RNA is single stranded

DNA is a very long molecule, in contrast RNA is fairly short

Both can carry the genetic code in their base sequence

Both are involved in protein synthesis

DNA holds the genetic code inside the nucleus whereas mRNA carries the genetic code out of the nucleus to ribosomes

mRNA and tRNA are involved in translation whereas DNA is only involved in transcription

rRNA is used to build structures called ribosomes, DNA does not form structures

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13
Q

Compare and contrast DNA in Eukaryotic cells and DNA in Prokaryotic cells (5 marks)

A

The nucleotide structure is identical in both

In both the nucleotides are joined together by phosphodiester bonds

Eykaryotic DNA is longer than prokaryotic DNA

Eukaryotic DNA contains Introns whereas prokaryotic DNA does not

Eukaryotic DNA is linear whereas prokaryotic DNA is circular

Eukaryotic DNA is associated w/ proteins (histones) whereas prokaryotic DNA is not

DNA is mitochondira and chlorplasts is the same as DNA in prokaryotes

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14
Q

Describe how DNA is replicated (6 marks)

A

-Strands separate by enzyme DNA Helicase

-Both strands act as a template

-free nucleotides attach to the bases

-Complementary base pairing -A-T and G-C

-Enzyme DNA Polymerase joins nucleotides/ forms covalent bonds between nucleotides (to form new DNA strand)

-H bonds reform causing helix to form

  • Semi-conservative replication: each new DNA molecule has one strand of original DNA and one new strand
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15
Q

Explain how ATP is able to act as the universal energy currency of living organisms (5 mark)

A

Releases energy when bonds between phosphate groups are broken

Energy release is quick/single hydrolysis reaction/immediate source of energy

Energy released in small manageable amounts

constantly regenerated/remade

can phosphorylate molecules and lower activation energy

provides energy for Active Transport

Provides energy for Protein Synthesis/DNA or RNA syntehsis

energy for movement plus example e.g. muscle contraction

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16
Q

H bonds between water molecules give water special properties. Outline these properties and their importance to living organisms (6 mark)

A

water has a high specific heat capacity, takes a large amount of energy to increase temperature of water

So it buffers temperature changes in aquatic ecosystems/ in the bodies of living organisms- Thermostability

water has a high latent heat of vaporisation so it takes a large amount of energy for liquid water to evaporate forming water vapour

Water acts as a coolant when it evaporates from body surfaces/sweating

Cohesion formed by H bonds between water molecules allow the flow of a continuous column of water up xylem vessels/surface tension for organisms such as pond skaters

Water can flow on mass so it acts as a transport medium e.g. blood plasma/phloem

Water is a solvent of polar substances allowing reactions to take place when reactants/enzymes and substrates move and collide in aqueous medium/dissolved in water or allows transport of dissolved solutes

Ice is less dense than liquid water so it floats allowing aquatic organisms to swim and feed in warmer deeper water/below the ice

17
Q

The properties of water provide a very stable environment for aquatic life. These properties include:

the density of water decreases as its temperature falls below 4C so ice floats

Water acts as a solvent for polar substances such as nitrate ions

Water has a high specific heat capacity

Explain how these three properties help organisms to survive in a pond (6 mark)

A

Floating ice insulates the water below (preventing further cooling)

fish/animals able to move and feed in the warmer water below the ice

dissolved ions such as nitrates can circulate in water (convection currents)

more ions/nitrates available for plants which grow more

So more food/plants available to animals

water is a very thermostable environment

Enzymes/metabolic reactions able to work at optimum

18
Q

Describe and explain how the process of centrifugation can be used to produce cell fractions containing pure nuclei, mitochondira and ribosomes (6marks)

A

tissue is chopped up and placed in a solution which is:

-isotonic to prevent osmosis which would cause organelles to burst or shrivel

-buffered to prevent any change in pH which would denature enzymes/proteins

-cold to reduce rate of enzyme which could damage organelles/reduce autolytic enzymes

tissue is homogensied to break open cells (releasing the organelles)

this tissue is then filtered to remove any large pieces of tissue

Placed in a centrifuge and spun at a high speed for a period of time so a pellet of nuclei forms

the remaining supernatant is centrifuged at a higher speed for longer so that the pellets contain mitochondria

centrifuge supernatant at higher speeds to obtain pellets of ribosomes.

19
Q

How has the development of the electron microscope improved our understanding of cells (6marks)

A

the EM has a greater resolution
L> becuase the beam of electrons has a short wavelength

EM has a better magnification
Scanning EM allows 3D image to be seen

Able to see small organelles such as (any from ribosomes, Golgi body, vesicles etc)

Able to see internal structures of organelles such as (any from mitochondrial cristae, thylakoid membranes in chloroplasts, bacterial plasmids)

20
Q

How do the organelles in a cell work together to produce and secrete a protein such as a antibody (5marks)

A

mRNA copy of DNA gene made in nucleus

-mRNA moves into cytoplasm through pores in the nuclear envelope

-mRNA attaches to ribosomes on the rough ER, the ribosomes make the protein

-Protein moves through the rough ER

-Protein enters golgi apparatus where it is modified and packaged into a vesicle

-vesicle carries protein to cell surface membrane where it is secreted (by exocytosis)

21
Q

Some substances cross the cell surface membrane of a cell by simple diffusion through the phospholipid bilayer. Describe other ways by which substances cross this membrane 5m

A

By Osmosis: -from a high to low water potential/down water potential gradient
-through aquaporins/ water channels

By Facilitated diffusion: -Channel/carrier proteins
-down concentration gradient

By active transport: -carrier protein/protein pump
-againt concentration gradient
-using energy from ATP

22
Q

The movement of substances across cell membranes is affected by membrane structure. Describe how 5m

A

-phospholipid bilayer allows diffusion of non polar/lipid soluble substances

-Phospholipid bylayer prevents diffusion of polar/charged/lipid soluble substances

-carrier proteins allow active transport

-channel/carrier proteins allow facilitated diffusion/cotransport

-shape/charge of carrier protein determines which substances are transported/move

-number of channel/carrier proteins determine how much movement

-membrane surface area determines how much movement

-cholesterol affects fluidity