Biological molecules Flashcards

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1
Q

how many elements do carbs have?

A

3 carbon, hydrogen and oxygen

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2
Q

general formula for carbohydrate?

A

Cx(H2O)y

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3
Q

what ae carbohydrates?

A

they are macromolecules

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4
Q

some carbs are polymers what are these?

A

they are made of monomers joined in polymerisation

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5
Q

what are the different types of polymers?

A

Monosaccharide - monomers of carbs
disaccharide - two monosaccharides
polysaccharide - many monosaccharides

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6
Q

what is the formula for monosaccharides?

A

(CH2O)n n= 3—7

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7
Q

characteristics of monosaccharides?

A

they are sweet and soluble in water

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8
Q

when n = 3 what occurs?

A

C3H6O3 — Triose

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9
Q

when n=6 what happens?

A

C6H12O6 — hexose

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10
Q

what do all monosaccharides end in?

A

ose

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11
Q

formula for alpha and beta glucose ring structure?

A

OH! ABBA

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12
Q

what does glucose form?

A

2 isomers alpha and beta same chemical formula different structures

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13
Q

what are 2 roles of these isomers?

A

source of energy for respiration - C-H bonds release energy when broken and they are important for building large molecules, glucose makes starch and deoxyribose

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14
Q

how are disaccharides formed?

A

when 2 monosaccharide join in condensation reaction H2O is released bond between monomers is glycosidic bond.

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15
Q

disaccharide maltose from 2 alpha glucose.

A

OH groups involved in condensation reaction, hydrolysis addition of H2O, C bonds join to O with 1-4 glycosidc bond H2O is released

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16
Q

what are the rules for these reactions?

A

circle groups involved
show water is released
circle + label bond formed

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17
Q

where are glycoproteins found?

A

in external layers of bilayer

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18
Q

what are glycoproteins for?

A

receptor sites on hormones + transmitters also for intercellular lubrication

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19
Q

what are polysaccharides?

A

polymers made of many monosaccharides joined in condensation reaction linked by glycosidic bond

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20
Q

where is the polysaccharide starch found and what monomer is used?

A

plants and alpha glucose

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21
Q

where is polysaccharide glycogen used and what monomer is used?

A

animal and fungi alpha glucose is used

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22
Q

where is polysaccharide cellulose found and what monomer is used?

A

plants and beta glucose

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23
Q

what do many plants use polysaccharides as?

A

as an energy store as its insoluble and doesn’t affect water potential unlike glucose

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24
Q

what is the main role of starch in plants?

A

used as an energy store , stored as granules in chloroplasts starch is 20% amylose and 80% amylopectin

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25
Q

what is the primary structure?

A

the order and sequence of amino acids in polypeptide chain, this is responsible for the final 3D shape, changing one amino acid may alter shape and therefore function

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26
Q

what is secondary structure?

A

this is how polypeptide chain begins to fold, can fold to form alpha helix or beta pleated, both held by H bonds. these can be broken by high heat and pH changes

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27
Q

what happens in alpha helix?

A

H bonds between amino acids 4 residules apart, it forms between carboxylic acid and amine group 4 molecules away.

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28
Q

what happens in beta pleated?

A

polypeptide chain folded into a structure with parallel amino acids held by H bonds

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29
Q

what is the tertiary structure?

A

how the secondary structure presen in the polypepide chain fold to produce 3D shape, shape is held by 4 bonds.

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30
Q

what are the 4 types of bond?

A

Hydrogen bonds
Ionic bonds
disulphide bonds
hydrophobic interactions

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31
Q

where do hydrogen bonds occur?

A

between R groups of amino acids or carboxylic of one and amine of then other broken by high temps or pH changes

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32
Q

where do ionic bonds occur?

A

between oppositely charged R groups these can be broken by pH changes

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33
Q

where do disulphide bonds occur?

A

between R groups of different cysteine amino acids these can be broken by reducing agents

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34
Q

where do hydrophobic interactions occur?

A

between hydrophobic R groups of different amino acids they come close together away from water

35
Q

what is quaternary structure?

A

two or more polypeptide chains held by H bonds, ionic, disulphide and hydrophobic interactions

36
Q

what is haemoglobin?

A

globular protein with 4 polypeptide chains two alpha chains and two beta chains held by H bonds.

37
Q

what does each chain contain?

A

a haem group containing iron ion

38
Q

what is the haem group known as?

A

the prosthetic group as it is not made by amino acids

39
Q

what can bond with the iron?

A

one oxygen molecule can reversibly bond

40
Q

what can each haemoglobin carry?

A

4 oxygen molecule

41
Q

how does the chain fold?

A

amino acids with hydrophilic r groups arrange themselves on the outside and hydrophobic amino acids arrange on inside to maintain the shape

42
Q

what is collagen?

A

it is a fibrous protein with quaternary structure it has 3 helical polypeptide chains arranged in triple helix held by H bonds. they are closely packed due to every 3rd amino acid being glycine, the smallest Amino acid R group just H atom

43
Q

how do collagens bond to each other?

A

using covalent bonds

44
Q

how do collagen fibrils form?

A

covalent bonds are staggered increasing tensile strength, lots of collagen fibrils together form fibres

45
Q

what are lipids?

A

diverse group of chemicals

46
Q

what is the most common lipid?

A

triglycerides found in Fats and Oils.

47
Q

what is triglyceride made of?

A

iglycerol and 3 fatty acids joined in condensation reactions linked by ester bonds

48
Q

3 roles of triglycerides?

A

source of energy- respired to release ATP
energy storage - can be stored in indipose cells
all biological membranes are made of lipids

49
Q

characteristics of amylose?

A

200-5000 alpha glucose per molecule
unbranched helical chain
1-4 glycosidic bonds
when coloured with iodine it is deep blue

50
Q

characteristics of amylopectin?

A
5000 - 100000 glucose per molecule
branched chain
1-4 glycosidic bonds on chain
1-6 glycosidic bonds between branches
red/purple when coloured with iodine
51
Q

what is role of glycogen?

A

main role in animals is store- stored as granules in muscle and liver.

52
Q

characterisitcs of glycogen?

A

1-4 glycosidic bonds between monomers

1-6 between branches similar to amylopectin however shorter branches

53
Q

role of cellulose?

A

to provide structural support it is made of beta glucose joined by 1-4 glycosidic bonds

54
Q

why must beta glucose be rotated 180 degrees?

A

because OH group is above the ring on C1.

55
Q

what does beta glucose form?

A

straight unbranched parallel chains

56
Q

how are these parallel chains linked?

A

cross linked by H bonds making the structure strong 60 - 70 linked known as microfibrils

57
Q

what are bundles of microfibrils known as ?

A

cellulose fibrils they are linked by H bonds

58
Q

where is cellulose found??

A

in the plant cell wall providing strength makes up 20 - 40 %

59
Q

features of cellulose?

A

it is fully permeable and high tensile strength this prevents the cell bursting during osmosis

60
Q

what are proteins?

A

they are macromolecules made of amino acids (monomers) make more than 50% of the dry cell mass

61
Q

what are elements found in proteins?

A
carbon
sulphur
hydrogen
oxygen
nitrogen
62
Q

what are functions of proteins?

A

component of plasma membrane
enzymes control cellular reaction
haemoglobin proteins found in blood cell transports O2

63
Q

how many types of amino acids are there?

A

20 types 8 are essential. they all have the same general structure vary by chemical elements found in the R group.

64
Q

what do amino acids have?

A

structure shown as amine group on left two C and N in central branch, R group above central C carbocylic acid on the second C, OH below.

65
Q

what are dipeptides?

A

two amino acids joined in condensation reaction using peptide bond

66
Q

how do two amino acids join?

A

carboxylic acid of one and amine of the other join in condensation reaction (hydrolysis) forming molecule plus water. joined using peptide bond.

67
Q

how can amino acids be linked?

A

by peptide bonds to form polypeptides.

68
Q

how many polypeptide chains are in collagen and haemoglobin?

A

collagen has 3

haemoglobin has 4

69
Q

why must polypeptide chains be folded?

A

to create specific 3D shape to allow them to carry out a specific funsction

70
Q

what is a phospholipid?

A

special type of lipid found in cell membrane, fatty acid tail is replaced by phosphate group.

71
Q

features of phospholipid?

A

head is hydrophilic

tail is hydrophobic

72
Q

roles of phospholipids?

A

major component of plasma membrane form a bi layer in water, they are responsible for partially permeable allow lipid soluble substances to enter and leave the cell.

73
Q

what does P.A.W.S stand for?

A

polar are water soluble

74
Q

how many regions does cholesterol have?

A

Hydrocarbon tail at bottom
then ring structures in middle
and hydroxyl group at the top

75
Q

what is polar?

A

hydroxyl group is polar - hydrophilic

76
Q

what is non polar?

A

ring structure and hydrocarbon tail - hydrophobic - lipid soluble

77
Q

why is cholesterol described as amphipathic molecule?

A

has water soluble and fat soluble regions

78
Q

what ios role of cholesterol?

A

as part of cell membrane regulates fluidity (less fluid at high temp) reduces side to side phospholipid movement they increase cell mechanical stability also prevent water and dissolved ion leakage

79
Q

what is the reducing sugar test?

A

you add benedicts reagent and then heat the solution a positive result will give brick red result

80
Q

what is starch test?

A

you add iodine which contains iodine dissolved I potassium iodide, a positive result is a blue black result

81
Q

what is the lipid test?

A

you add ethanol to the sample and shake, then poor liquid into water, result is emulsion result

82
Q

what is protein test?

A

add biurets to a sample which contains potassium hydroxide copper -2- sulphate and heat. a positive result is purple colour

83
Q

what is non reducing sugars test?

A

same as reducing if a negative result use benedicts test add HCL heat it and then neutralise with sodium hydrocarbonate. add benedicts and heat. positive is a brick red result