Bioinformatics 6: publications, archives, information retrieval Flashcards

1
Q

What is PLOS? Perks of using it?

A

PLOS (Public Library of Science) is a nonprofit open-access science publisher

Part of open access movement:

  • Authors pay to publish from research funds
  • Immediate free online access
  • Author retains copyright
  • Re-use with attribution is allowed
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2
Q

UK copyright law length?

A

70 years

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3
Q

The fundamental principles of a database?

A

Archive of information (content) e.g. papers

  • has defined data format
  • ontology - list of defined, valid terms
  • scheme - description of how information its inter-related
  • tools to access website
  • links to other relevant databases
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4
Q

2 approaches to data annotation and quality control?

A

1) Dedicated human curators (use software/experience)

2) Automated systems (scan data to spot obvious errors)
e. g. PDBREPORT, GOChase

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