Biofilms Polymicrobial Infections Flashcards

1
Q

What are classical infections?

A

Classical infections are caused by a single organism.

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2
Q

Where do these organisms derive from?

A

These organisms are of exogenous source, meaning they are not found in our resident microbiota.
i.e. not part of normal flora

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3
Q

What do these organisms do once they enter the body?

A

These Organism colonise a susceptible host, multiply and evade host defence. They damage the host, normally by the production of protein toxin (exotoxin).

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4
Q

What are polymicrobial infections?

A

An infection associated with more than one microbe.

A mixture of one type of microorganism, e.g. different species of bacteria.

Combinations of different types of microorganism, e.g. bacteria and
viruses, bacteria and protozoa, fungi etc.

Impossible to apply Koch’s postulates to polymicrobial infections.

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5
Q

Give Examples of Polymicrobial infections in the oral environment.

A

Dental caries
Angular Cheilitis
Dental Abscesses
Denture Stomatitis - Denture stomatitis causes redness, swelling and tenderness in the mouth. While the condition is most common among denture wearers, it can affect anyone
Periodontal Disease

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6
Q

Give an example of a secondary infection.

A

In some cases an initial infection can predispose to a more serious secondary infection. We often see this in the Lung (non-sterile organ with resident microbiota).

Viral infection of Lung tissue predisposes to secondary bacterial Infection.

1918 Influenza pandemic: 50 - 100 million Majority of deaths were from bacterial pneumonia (secondary infection).

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7
Q

How do the lungs develop a secondary infection such as pneumonia?

A

Initial viral infection causes damage to lung tissue.

Tissue damage exposes basement membrane elements such as fibrinogen to which bacteria can adhere and infiltrate into the host.

Viral neuraminidase cleaves sialic acid residues on host cells, creating more bacterial binding sites (neuraminidase inhibitors reduce S. pneumoniae infiltration in experimental models).

Bronchitis or pneumonia caused by Streptococcus pneumoniae (pneumococcus), Haemophilus influenzae or S. aureus. this all leads to impaired host immune response.

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8
Q

How is the host immune response impaired?

A

Over-activity of immune system

Overproduction of inflammatory cytokines leading to infiltration of bacteria, lymphocytes, neutrophils and macrophages. Damages alveolar architecture

Secondary bacterial infection leads to more prolonged and severe clinical symptoms when compared to viral infection alone.

Bacterial invasion can lead to septicaemia. A frequent cause of death, particularly in the elderly.

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9
Q

What are the factors that underpin Septicaemia?

A
  1. virus
  2. secondary bacterial infection
  3. dysregulated host immune response gives rises to large quantities of cytokines also known as a cytokine storm.
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10
Q

How can we prevent primary viral infection and mitigate the effects of secondary infections?

A

Vaccinations - Immunisation with influenza vaccine reduces pneumonia and influenza hospitalisations by 52% and deaths by 70% in individuals over 65.

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11
Q

For primary viral disease, why shouldn’t we give antibiotics?

A

The current recommendation to reduce antibiotic resistance is not to use antibiotics to treat viral diseases.

However, In vulnerable populations such as the elderly and other high risk groups,
aggressive antiviral and antibacterial therapy at the first sign of influenza infection is warranted to prevent secondary bacterial infection.

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12
Q

What are biofilms?

A

Biofilms are a matrix-enclosed population of
microbes that can adhere to biotic and abiotic substrates.

Biofilms are the most prevalent manifestation of polymicrobial communities.

Present in numerous natural environments. Biofilms are complex and dynamic structures

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13
Q

What substrates can biofilms adhere to?

A

Biotic substrates that biofilms can adhere to: skin/mucosal surfaces/teeth

Abiotic substrates that biofilms can adhere to:
Dentures/acrylics/resins
Intravenous/urinary catheters
Abdominal drains, Stents
Ventilator tubes, feeding tubes
Contact lenses, Heart valves

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14
Q

Describe the composition of biofilms.

A

The composition of a biofilm changes over time from person to person, between individual substrates and tissue sites, and in response to changes in the environment.

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15
Q

How does biofilm develop?

A

Biofilm development in the oral cavity is continuous and sequential.
1. The substratum is coated with a conditioning film. The first microbes arrive (primary colonizers) these interact with the film initially through electrostatic forces of attraction and then through a more robust covalent interaction mediating through adhesins.

  1. These primary colonisers obtain nutrients and undergo cell division and form structures called microcolonies. These microcolonies form a substance called EPS.
  2. Coadhension of single cells or groups of cells or coaggregates (groups of different species microbes) these are incorporated into the growing biofilm.
  3. Succession occurs - the selective pressure that is imposed upon a developing population of microbes. Due to succession, the compositions of the biofilm changes over time until the equilibrium is reached, once reached this is known as the final stage which is a mature multi-species biofilm also known as the climax community.
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16
Q

How does the biofilm develop on the tooth?

A

Due to the hydroxyapatite in the tooth enamel the acquired pellicle can form. As soon as saliva contacts the teeth surface,salivary proteins adhere to the tooth surface to form acquired salivary pellicle.

Once the acquired pellicle is present it is colonised by early colonisers. Streptococcus sp occurs first. Streptococcus sp is followed by other early colonisers.

Which is followed by late colonisers such as T. forsythia and T. denticola.

These bacteria interact with one another through adhesins that they have on their surface.

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17
Q

What are EPS?

A

Mature biofilms are encased in a matrix of extrapolymeric substances.

look at slide 23

18
Q

What are the features of EPS?

A
  1. Mechanical stability
  2. Facilitates cell-cell interaction
  3. Reduced efficacy of antimicrobials/immune cells
  4. Microbes that grow in a biofilm are less sensitive to antibiotics than those that live free in suspension
19
Q

What are the Advantages of life in a biofilm?

A

Biofilms offer several advantages over
planktonic growth:

Increased metabolic fitness: nutritional co-operation
Increased genomic diversity: horizontal gene transfer and antibiotic resistance
Increased stress resistance: (biological/chemical/physical)
Aerobic bacteria can lower oxygen tension providing the means for anaerobic species to survive.

20
Q

define Recalcitrance.

A

reduced antibiotic penetrance into the biofilm
reduced antibiotic diffusion within the biofilm

21
Q

explain how periodontitis is a biofilm disease.

A

Polymicrobial infection of the subgingival crevice.

Associated with a shift in gram status of the
microbiota and chronic inflammation of the gums

Damage to structures supporting the tooth resulting in the Resorption of alveolar bone – tooth loss.

22
Q

Explain the Dynamics of Biofilm maturation.

A

Oral biofilms can be healthy or dysbiotic. As the biofilm develops there is an increase in the complexity.

In a healthy situation predominantly there is gram-positive facultative microbes as the age of the biofilm changes and the community increases in complexity there is a shift towards more gram-negative species which tend to be more aerobic, and these changes can lead to these changes in biofilm composition can lead to dysbiosis.

23
Q

During the periodontis explain the transition in resident microbiota.

A

Healthy microbiota, Subtle changes in
composition of microbiota results in gingivitis.

Stabilisation of dysbiotic polymicrobial community can lead to the development of periodontitis.

24
Q

explain the effects of Polymicrobial infections: Diabetic Foot Ulcers.

A

High blood sugar this leads to:
Underlying conditions such as -
Nerve damage (neuropathy)
Reduced blood flow (microangiopathy)
Chronic inflammation

this triggers Inappropriate foot care and Foot injuries

25
Q

How does Polymicrobials interaction within biofilms?

A

Polymicrobial interactions within biofilms are numerous, dynamic and complex.

classifies into three types:
1.physical - co aggregation
2.chemical - quorum sensing
3.nutritional - digestive consortiums

26
Q

Explain Physical interactions: co-aggregation.

A

Process whereby genetically distinct bacteria attach to each other via specific molecules called adhesins.

Co-aggregates are derived from planktonic cells these are cells found floating free in suspension.

Co-aggregates can influence the development and composition of polymicrobial biofilms.

27
Q

explain how bacteria can associate physically with fungi.

A

Candida albicans is a fungus that can produce
pathogenic invasive filaments called “hyphae.

S. aureus can adhere to C. albicans hyphae

Systemic bacterial infection is facilitated by invasive hyphal filaments. A significant problem in hospitals where in-dwelling catheters, IV lines
and abdominal drains are frequently affected

28
Q

What is denture stomatitis?

A

A polymicrobial biofilm-mediated condition.

Biofilm accumulates on dentures and is
colonised by fungi (typically Candida) species as they have not been cleaned properly.

Constant contact of fungal/bacterial biofilm with the oral mucosa.

Poor dental hygiene and failure to remove dentures allow bacteria, fungi and associated virulence factors to cause inflammation.

29
Q

Explain chemical interactions: quorum sensing

A

Quorum sensing is the regulation of gene expression in response to fluctuations in cell-population density.

Microbes secrete quorum sensing molecules (QSM). When present in sufficient concentrations, quorum sensing molecules induce the expression or repression of quorum-dependent target genes – changes in transcriptional activity

Specific changes in population behaviour occur when a critical threshold of signalling is exceeded.

30
Q

Give examples of quorum sensing molecules.

A
  1. AutoInducer-2 (AI-2) (G -ve and +ve bacteria)
  2. N-acyl Homoserine Lactones (NAHL) (G -ve bacteria)
  3. Competence Signalling Peptides (G +ve bacteria)
31
Q

explain Quorum sensing in fungi.

A

Candida albicans can adopt different physical forms:
yeast - Typically associated with mucosal health
hyphae - Associated with mucosal disease

Candida albicans hyphae can form a biofilm

32
Q

what inbits the transition of Candida albicans to the biofilm?

A

Farnesol is a QSM that inhibits Candida albicans filamentation

33
Q

Explain Nutritional interactions.

A

Acquisition of nutrients is important for biofilm
persistence.

Principal substrates available in the mouth include proteins, sugars and glycoproteins (albumin, mucins, transferrins).

In general, individual microbial species are unable to completely degrade all of these substrates on their own.

However, species can co-operate with each other to do so.

34
Q

What are Digestive consortiums?

A

Digestive consortiums convert a complex substrate into simple molecules. look at slide 42

35
Q

What is Polymicrobial co-operation?

A

Microbes can persist as part of a polymicrobial
community in harsh environments that would
otherwise be lethal to them in mono-culture.

36
Q

What are accessory pathogens?

A

Accessory pathogens: commensal microbes that
can support or enhance the virulence of a different organism.

37
Q

What is an abscess?

A

An example of polymicrobial co-operation is abscess. Abscess is the Introduction of endogenous oral microbes into a normally sterile
tissue site.

Most oral bacteria are unable to form abscesses on their own in experimental abscess models, to produce an abscess you need a Minimum combination of 6-8 species.

38
Q

Give other examples of Polymicrobial co-operation.

A

Microbial subversion/evasion of host immune responses:
Subversion of complement (P. gingivalis, T. forsythia)
Manipulation of neutrophils (P. gingivalis)
Inhibition of macrophage responses (P. gingivalis)

39
Q

how many species of bacteria can be found in periodontal pocket?

A

over 100 different bacterial species

40
Q

What are the unculturables microbes?

A

Some species thrive in situ (in the host), but do not grow by themselves under standard laboratory conditions.

So-called “unculturables” were removed from the infection site but unable to grow as a single (isolated) species without appropriate “helper” strains.

If the infection is composed of multiple species, detection and Identification can be problematic.

41
Q

How can polymicrobial infections be diagnosed?

A

Detailed diagnosis is time-consuming and costly

Organisms will be present in varying numbers
Sometimes difficult to detect those in smaller
numbers (keystone pathogens).

16S rRNA Next-Generation Sequencing and OTU determination(to identify the genus of the microbes)

These techniques can be difficult identifying organisms to species level.

42
Q

What is the treatment for polymicrobial infections?

A

The tremendous species diversity within polymicrobial communities presents a significant challenge to effective treatment.

Resistance to antimicrobials and antibiotics is a growing concern

In practice, inhibiting growth or killing the majority of infecting microbes will have positive clinical results, but outcomes are difficult to predict.