Bioenergetics Flashcards
The sum of all chemical reactions involved in maintaining the dynamic state of a cell or organism
Metabolism
Series of biochemical reactions
Pathway
The process of breaking down large nutrient molecules into smaller molecules with the concurrent production of energy
Catabolism
Sum of catabolism and anabolism
Metabolism
Process of synthesizing larger molecules from smaller ones
Anabolism
Where replication takes place
Nucleus
Remove damaged cellular components and some unwanted foreign materials
Lysosomes
oxidative process that releases energy
exothermic
reduction process that requires energy
endothermic
the loss of electrons
oxidation
the substance that
gains the electrons is called?
oxidizing agent
the substance that
loses the electrons is called?
reducing agent
agents for the transfer of electrons in biological oxidation-reduction reactions
FAD/FADH2
the gain of electrons
reduction
Carbon in most reduced form
alkane
agents for the transfer of electrons in biological oxidation-reduction reactions
NAD+/NADH
Carbon in most oxidized form
CO2 (final product of
catabolism)
agents for the storage and transfer of phosphate groups.
AMP, ADP, and ATP
An agent for the transfer of acetyl groups
Coenzyme A; abbreviated CoA or CoA-SH
most important compound involved in the
transfer of phosphate groups
ATP
ATP contains what bonds?
- 2 phosphoric anhydride bonds
- 1 phosphoric ester bond
a common currency for the storage and transfer of energy
ATP
T or F: Nicotinamide adenine dinucleotide (NAD+) is a biological oxidizing agent
True
T or F: Hydrolysis of a phosphoric anhydride liberates less energy than the hydrolysis of a phosphoric ester
False - more energy
a universal carrier of phosphate groups
ATP
Succinate to Fumarate
FAD to FADH2
Malate to Oxaloacetate
NADH+ to NADH w/ H+
inhibited by ATP, and NADH; also product
inhibition by citrate
Citrate synthase
activated by ADP and NAD+, inhibited by ATP and NADH
Isocitrate dehydrogenase
inhibited by ATP and NADH; activated by ADP and NAD+
a-Ketoglutarate dehydrogenase complex
Oxidative phosphorylation is carried out by four closely related multi-subunit membrane-bound complexes and two electron carriers
- coenzyme Q
- cytochrome c
What complex transforms NADH to NAD+, thus releasing 2 moles of H+
Complex I
What complex transforms CoQH2 to COQ, thus releasing 2 moles of H+ (in addition to reduction of 2 moles of cytochrome c)
Complex III
What complex transforms FADH to FAD
Complex II
What complex transforms oxygen air and protons into water
Complex IV
This complex is also known as cytochrome oxidase
Complex IV
Who proposed the chemiosmotic theory?
Peter Mitchell
T or F: There is a higher concentration of H+ in the intermembrane space than inside
the mitochondria
True
This proton gradient provides the driving force to propel protons back into the
mitochondrion through the enzyme complex called?
proton-translocating ATPase
Number of ATP molecules produced per mole of GTP
1 ATP
Number of ATP molecules produced per mole of FADH2
1.5 to 2 ATP
Number of ATP molecules produced per mole of NADH
2.5 to 3 ATP
The body maintains a K+ concentration gradient across cell membranes
higher inside and lower outside
It maintains a Na+ concentration gradient across cell membranes
lower inside, higher outside
ATP drives the alternating association and dissociation of actin and myosin and, consequently, the contraction and relaxation of muscle tissue
Mechanical energy
Hydrolysis of ATP to ADP yields 7.3 kcal/mol; Some of this energy is released as heat to maintain body temperature
Heat energy
Standard set of conditions used for comparisons of chemical reactions
Standard states
This reaction occurs without added energy
Spontaneous reaction
States that when a stress is applied to a system at equilibrium, the system reacts so as to minimize the effect of that stress
Le Chatelier’s principle
Equation that shows either the oxidative or the reductive part of an oxidation–reduction reaction
Half reaction
Nonprotein substance that takes part in an
enzymatic reaction and is regenerated at the end of the reaction
Coenzyme
Functional group involved in the reaction; Derivative of nicotinic acid
Nicotinamide portion
Involves a metabolite bonding to some other molecule
Activation in bioenergetics
Provide the reducing power needed for the
anabolic processes of biosynthesis in reduced form
Coenzymes
bonds that require or release
convenient amounts of energy, depending on the direction of the reaction
“High Energy” bonds
This is an essential high energy bond-containing compound
ATP
first stage of glucose metabolism
Glycolysis
A very important biomolecule – plays a
key role in the energy extraction
Pyruvate
Anaerobic glycolysis produces what?
lactate
Aerobic oxidation ptoduces what?
6 CO2 and 6 H2O
Anaerobic alcoholic fermentation produces what?
2 CO2 and 2 ethanol
[Glycolytic Pathway] glucose-6-phosphate to fructose-6-phosphate
Isomerization
[Glycolytic Pathway] glucose to glucose-6-phosphate
Phosphorylation
[Glycolytic Pathway] fructose-6-phosphate to fructose-1,6-bisphosphate
Phosphorylation
[Glycolytic Pathway] fructose-1,6,-bisphosphate to glyceraldehyde-3-phosphate and dihyroxyacetone phosphate
Cleavage
[Glycolytic Pathway] dihyroxyacetone phosphate to glyceraldehyde-3-phosphate
Isomerization
[Glycolytic Pathway] glyceraldehyde-3-phosphate to 1,3-bisphosphoglycerate
Oxidation
[Glycolytic Pathway] 1,3-bisphosphoglycerate to ADP to give 3-phosphoglycerate
Phosphate transfer
[Glycolytic Pathway] 3-phosphoglycerate to give 2-phosphoglycerate
Isomerization
[Glycolytic Pathway] 2-phosphoglycerate to give phosphoenolpyruvate
Dehydration
[Glycolytic Pathway] phosphoenolpyruvate to ADP to give pyruvate
Phosphate transfer
[TCA Cycle] acetyl-CoA with oxaloacetate to citric acid
Condensation
[TCA Cycle] citric acid to isocitrate
Isomerization
[TCA Cycle] isocitrate to a-ketoglutarate
Oxidation
[TCA Cycle] ketoglutarate to succinyl-CoA
Oxidative decarboxylation
[TCA Cycle] succinyl-CoA to succinate
Hydrolysis
[TCA Cycle] succinate to fumarate
Oxidation
[TCA Cycle] fumarate to L-malate
Hydration
[TCA Cycle] malate to oxaloacetate
Oxidation
Isocitrate is oxidized to a-ketoglutarate through what reaction?
isocitrate dehydrogenase
isocitrate dehydrogenase reaction produces
CO2 and NADH
inhibited by ATP and NADH; also product inhibition by acetyl-CoA
Pyruvate dehydrogenase
transport metabolites between mitochondria and cytosol
Shuttle mechanisms
found in mammalian brain and muscles; this shuttle produces 1.5 ATP in the mitochondria for each cytosolic NADH
Glycerol phosphate shuttle
found in mammalian kidney, liver, and heart; this shuttle 2.5 mitochondrial ATP for each cytosolic NADH
Malate-Aspartate Shuttle
Complete breakdown requires _______ to degrade the a(1->6) linkages
debranching enzymes
one whose carbon skeleton is degraded to pyruvate or oxaloacetate, both of which may then be converted to glucose
Glucogenic amino acid
one whose carbon skeleton is degraded to acetyl-CoA or acetoacetyl-CoA, both of which may then be converted to ketone bodies
Ketogenic amino acid
catalyze hydrolysis of bonds between fatty acid and the rest of triacylglycerols
Lipases
catalyze hydrolysis of bonds between fatty acid and the rest of phosphoacylglycerols
Phospholipases
a series of reactions that cleaves carbon atoms two at a time from the carboxyl end of a fatty acid
B-Oxidation
Hydration of the carbon-carbon double bond
Reaction 2
Oxidation of the a,B carbon-carbon single bond to a carbon-carbon double bond
Reaction 1
Oxidation of the B-hydroxyl group to a carbonyl group
Reaction 3
Cleavage of the carbon chain by a reverse Claisen reaction
Reaction 4