biochemistry of photosynthesis 2 Flashcards

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1
Q

RuBP

A

5C compound ribulose biphosphate

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2
Q

first step of the calvin cycle

A

carbon dioxide from the air combined with RuBP in the chloroplasts

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3
Q

carbon fixation

A

when carbon is attaches to RuBP it is fixed

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4
Q

RUBISCO

A

ribulose biphosphate carboxylase oxygenase
-aids carbon dioxide from air combining with 5C RuBP
-RUBISCO is rate limiting enzyme in process of photosynthesis

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5
Q

result of reaction between RuBP and CO2

A

in theory 6C compound

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6
Q

why is the 6C compound produced in theory only

A

because it is highly unstable and no one has been able to isolate it

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7
Q

what happens to the 6C compound produced in the reaction between RuBP and CO2

A

-it splits to give 2 molecules of GP 3C

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8
Q

what happens to GP after being produced by splitting of 6C

A

it is reduced by addition of hydrogen to form glyceraldehyde 3-phosphate 3C

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9
Q

glyceraldehyde 3-phosphate

A

GALP 3C sugar

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10
Q

where does the hydrogen that reduced GP come from

A

from reduced NADP and the energy required comes from ATP made in light stage

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11
Q

2 pathways for GALP

A

-much of it passes through series of steps to replace RuBP needed in first step of cycle
-some synthesised into 6C glucose or passed directly into glycolysis pathway where its used for synthesis of other molecules needed by plant

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12
Q

features of reactions that take place in calvin cycle

A

take place in both dark and light
-reactions only stop in dark when products of light reaction run out leaving no reduced NADP or ATP available in the chloroplasts

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13
Q

how is RUBISCO inefficient

A

the active site cannot distinguish between the carbon oxygen double bonds of CO2 molecules and the oxygen oxygen double bonds of 02
-as a result there is competitive inhibition between the 2

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14
Q

RUBISCO as carboxylase

A

in high levels of CO2 low O2 RUBISCO binds to oxygen and combined it with RuBP giving two GP which feeds into calvin cycle

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15
Q

RUBISCO as oxygenase

A

in low CO2 high O2 RUBISCO binds to oxygen and combined RuBP to form one molecule of GP and one glycolate 2-phosphate
-this is converted into GP in photorespiration

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16
Q

photorespiration

A

-process by which glycolate 2-phosphate is converted to GP
-reaction that used products of calvin cycle and ATP and releases CO2
-photorespiration name because it uses CO2 and O2

17
Q

affinity of RUBISCO

A

affinity for CO2 80% higher than affinity for oxygen

18
Q

inefficiency of photorespiration

A

needs to convert GP2 to 3C GP so wastes carbon and energy
-thats why plants 25& less efficient than they should be

19
Q

why is RUBISCO so inefficient

A

RUBISCO evolved when atmosphere was high in co2 with little o2 so photorespiration never occurred and no selection pressure against i t
-even today high oxygen low co2 atmosphere photorespiration not problem for plants
-no selection pressure for enzyme to evolve to become more specific to CO2
-however more efficient RYBISCO useful for people because crop plants would be 25% more productive

20
Q

whats the end product of photosynthesis

A

GALP and key molecule for synthesis of everything else needed in plant

21
Q

different uses of GALP in plant

A

some GALP directly used in glycolysis so fed into krebs cycle
-some of GALP produced in calvin cycle used to produce glucose by gluconeogenesis

22
Q

gluconeogenesis

A

process by which some of GALP produced in calvin cycle if used to produce glucose

23
Q

what happens to glucose produced in gluconeogenesis

A

-glucose may be converted into disaccharides such as sucrose for transport round the plant and into polysaccharides such as starch for energy storage and cellulose for structural support

24
Q

function of GALP that feeds into glycolysis and krebs cycle

A

used as fuel to provide energy in form of ATP for functions of the cell

25
Q

use of compounds from glycolysis and krebs cycle

A

used as the building blocks of amino acids combining the molecules with nitrates from the soil

26
Q

use of GALP if it continues round the calvin cycle

A

it can be used for the production of nucleic acids with the addition of phosphates from the soil

27
Q

function of some of GALP taken in by glycolysis pathway

A

converted to acetyl coenzyme A which can be used to synthesise fatty aids needed for production of phospholipids for membranes and lipids needed for storage and other functions within the plant

28
Q

C3 plants

A

majority of plants which use this pathway where CO2 fixed directly into 3C compounds

29
Q

C4 plants

A

alternative route to C3 plants
-they produce compound 4C and use this to raise the CO2 levels in cells at all times
-this minimised photorespiration making photosynthesis more efficient

30
Q

CAM plants

A

have evolved in hot dry ecosystems
-adaptation enables them to keep their stomate closed during the day reducing water loss and still having plenty of carbon dioxide for efficient photosynthesis

31
Q

what does the amount of light affect in photosynthesis

A

the amount of chlorophyll which is excited and therefore the amount of reduced NADP and ATP produced in light dependent stage

32
Q

what happens if there is low light levels in photosynthesis

A

insufficient NADP and ATP will be produced to allow the reactions of the light independent stage to progress at their max rate
-limiting factor

33
Q

why are co2 levels important in photosynthesis

A

if there is not enough co2 available for fixing in the calvin cycle the reactions cannot proceed at max rate

34
Q

most common limiting factor

A

co2

35
Q

temperature in relation to calvin cycle

A

all of calvin cycle reactions and light dependent reactions controlled by enzymes and are sensitive to temperature

36
Q

photosynthesis and its limiting factors in the real world

A

-in wild plants ecosystems develop are governed by competition by plants
-eg co2 levels dont vary in air but plants compete for warmth and light
-complete for nutrients that are needed to convert carbs into proteins and fats
-growth in height, spread of leaves depends on plant adapted to get as much light