Biochemistry Flashcards
Glycosidic bonds are considered which of the following types of bonds?
covalent
Glycosidic bonds (shown below), also called glycosidic linkages, are considered covalent bonds formed via dehydration/condensation reactions occurring between two monosaccharides that join resulting in a loss of a water molecule for each covalent bond formed.
Covalent bonds are a type of bond where electrons are shared either between atoms of identical electronegativities equally (non-polar covalent) or with differing electronegativities (polar covalent) unequally.
Alpha helices and beta sheets are connected to their respective strands with which of the following bonds?
A. Hydrogen bonds
Alpha helices (shown below) and beta sheets are connected to their respective strands with the use of hydrogen bonds (bonds occurring when hydrogen is bonded to either fluorine, oxygen, or nitrogen).
Hydrogen bonding is the most prevalent interaction that occurs between carboxyl and amino groups of adjacent amino acids forming a polypeptide’s most common secondary structures, the alpha helix and beta sheets.
he bonds to create the tertiary structure of proteins can be associated with all of the following EXCEPT one. Which one is the EXCEPTION?
A. Vander der Waals
B. Ionic bonds
C. Hydrogen bonds
D. Metallic bonds
E. Disulfide bonds
D. Metallic bonds
The tertiary structure of a protein (shown below) represents the three-dimensional or overall shape of a protein caused by interactions of amino acid side chains, such as hydrophobic interactions, Vander der Waals interactions, ionic bonds, hydrogen bonds, and disulfide bridges.
Which of the following connects the amino acids of the primary structure of proteins?
covalent bonds
The primary structure of a protein (shown below) is comprised of a linear sequence of amino acids. These amino acids are linked via a peptide or covalent bond that attaches one AA’s carboxyl group and the other AA’s amino group together by undergoing dehydration reactions.
Which of the following compounds contain the strongest bonds?
A. NaCl
B. H2O
C. HNO3
D. CH4
E. HF
A. NaCl
Ionic bonds are formed between ions with opposite charges, as shown below. The electrons are not shared between the atoms as seen in covalent bonding, but rather are associated more with one ion than the other. Although hydrogen bonding may be seen in choices B, C, and E, it is not as strong as ionic bonding.
Which of the following lists the correct order from smallest to largest?
pam
Proton, atom, molecule
Protons are subatomic particles with a +1 electrical charge. Atoms, shown below, are known as the smallest unit of matter that still retains the properties of an element. They are comprised of protons, neutrons, and electrons. Finally, molecules form when two or more atoms join by chemical bonds.
A molecule is a group of
two or more atoms
Molecules are formed when two or more atoms join together by the use of chemical bonds (covalent bonds), as shown below:
Fluorine can strongly attract electrons because of its:
Electronegativity
The attraction an atom has for electrons is called its electronegativity. In other words, it is “how thirsty” an element is for electrons. The more electronegative an atom is (fluorine being the most electronegative element on the periodic table), the more it can pull electrons toward itself.
The bond in red is which type of bond?
A. Polar covalent bond
B. Non-polar covalent bond
C. Metallic bond
D. Ionic bond
E. Hydrogen bond
A. Polar covalent bond
Polar covalent bonds are chemical bonds formed between atoms that share electrons and have different electronegativities. On the other hand, hydrogen bonds are a type of bond formed when a Hydrogen (H) atom is bound to a highly electronegative atom (such as F, O, or N), causing the Hydrogen atom to take on a more positive charge. The more positively charged hydrogen atom is then attracted to another highly electronegative atom with at least one lone pair of electrons (typically F, O, or N).
You may be wondering why the bond in red is not a hydrogen bond. The hydrogen bond shown in the picture is polar covalent because it is a direct covalent bond between N and H atoms. A hydrogen bond would only be formed in this case if this ammonia molecule interacted with another ammonia molecule, as seen below:
Covalent bonds can have all the following properties EXCEPT one. Which one is the EXCEPTION?
A. Non-polar
B. Polar
C. Single bond
D. Double bond
E. Ionic bond
E. Ionic bond
Depending on the number of electrons being shared, covalent bonds can be single, double, or triple bonds, as shown below. Furthermore, non-polar covalent bonds involve the equal sharing of electrons between atoms whereas polar covalent bonds involve the unequal sharing of electrons.
Ionic bonds on the other hand are formed between ions with opposite charges. The electrons are not shared between the atoms as seen in covalent bonding, but rather are associated more with one ion than the other.
Which of the following bonds occurs due to the even sharing of electrons between two atoms with similar electronegativity?
A. Ionic bond
B. Covalent nonpolar bonds
C. Covalent polar bonds
D. Hydrogen bonds
E. Metallic bonds
B. Covalent nonpolar bonds
Covalent non-polar bonds are involved with the even or equal sharing of electrons between two atoms of similar or the same electronegativity. Different types of covalent bonds are shown below:
Which of the following bonds occur due to the uneven sharing of electrons between two atoms with different electronegativity?
A. Ionic bond
B. Covalent nonpolar bonds
C. Covalent polar bonds
D. Hydrogen bonds
E. Metallic bonds
C. Covalent polar bonds
Covalent polar bonds occur when an atom is bonded to another more electronegative atom preventing equal sharing of electrons between atoms, as shown below:
Which of the following would be the best biological solvent?
A. Water
B. Saline water
C. Triglycerides
D. Blood plasma
E. Sucrose
A. Water
Solvents can be described as a substance’s dissolving agent, while the thing that gets dissolved is described as the solute.
In the scenario of putting sugar in water, water acts as the solvent while sugar acts as the solute. The image below shows NaCl mixed with water. Note that hydrogen will encircle negatively charged ions, while oxygen will encircle positively charged ions.
Water is a very reliable solvent primarily due to the polarity it contains. However, it is important to note that, although the versatility of water as a solvent is vast, water is not a universal solvent. If it was, any container holding water, including our cells would be dissolved
Which of the following properties of water make it the best biological solvent?
A. High heat capacity
B. Dipoles of H2O
C. Surface tension
D. Adhesion
E. Cohesion
B. Dipoles of H2O
Water’s polarity caused by the dipoles of H2O allows it to function as a great solvent for polar substances and ions. This is due to polar molecules being more attracted to water i.e., being hydrophilic. Whereas non-polar molecules are repelled by water i.e., they are hydrophobic. This results in water making non-polar molecules aggregate together to avoid other water molecules, while polar substances dissolve further in the polar water. Shown below is an image of a water molecule:
The high heat of vaporization of water is explained by its:
A. High heat capacity
B. Dipoles of H2O
C. Surface tension
D. Adhesion
E. Cohesion
A. High heat capacity
The heat of vaporization of a substance can be described as the quantity of heat a liquid must absorb to transition from a liquid to a gaseous state. As a result of the same reason that water contains a high specific heat, i.e., because of its ability to form hydrogen bonds, it too contains a high heat of vaporization. This means, that due to requiring more heat to increase the temperature of water, it will also require more heat to vaporize the water.
If a large body of water is surrounded by a very high atmospheric temperature, which of the following will occur?
A. The temperature will be stable
B. The temperature will drop drastically
C. The temperature will increase drastically
D. The surface tension of the water will decrease drastically
E. The surface tension of the water will increase drastically
A. The temperature will be stable
The specific heat capacity of a substance is defined as the amount of heat that must be absorbed or lost for 1 g of that substance to change its temperature by 1 degree Celsius.
The ability of water to stabilize temperatures comes from its relatively high heat capacity. Because of the high specific heat of water relative to other materials — water contains the ability to minimize temperature changes of organisms living in large bodies of water and the environment.
Why is ice able to float in liquid water?
A. Ice is denser
B. Ice is less dense
C. Water is less dense
D. Water condenses
E. H-bonds become more fluid as ice
B. Ice is less dense
Unlike most substances you will encounter, water is one of the select few that are less dense as a solid than it is as a liquid due to the lattice structure of ice (shown below in (a)).
This means that while other substances may contract and become denser as they solidify, water instead expands due to the presence of extensive hydrogen bonding. This allows ice to float (shown below in (b)), as its density in the solid phase is less than water’s density when present in the liquid phase.
Which of the following occurs on a molecular level as water freezes?
A. Water condenses
B. H-bonds become more structured
C. H-bonds become more flexible
D. Crystalline structure disappears
E. The heat of vaporization changes
B. H-bonds become more structured
At low enough temperatures, water molecules begin to get locked into a crystal-like lattice structure (shown below in (a)) of hydrogen bonds, resulting in the formation of ice.
As the H-bonds become more structured, ice becomes less dense than liquid as water molecules get spaced further apart causing ice to float (shown below in (b)).
Which of the following properties of water allows insects to “walk” on its surface?
A. Heat of vaporization
B. Density
C. Cohesion and adhesion
D. High heat capacity
E. Covalent bonding
C. Cohesion and adhesion
Due to water’s polarity, it has the ability to be attracted to one another. This is what describes water’s ability to demonstrate its cohesive nature. Liquid water cohesion, in combination with adhesion, is responsible for water’s high surface tension. This allows small insects to walk on water, as shown below, because present at the air-water interface, there is extensive hydrogen bonding by the surface water molecules with the molecules below them
In the wintertime, a pond forms an ice surface. Which of the following best explains why?
A. Water is less dense than ice
B. The crystalline structure of ice is less dense than water
C. Cohesive properties of water allow ice to float
D. Adhesive properties of water allow ice to float
E. The high heat of vaporization prevents ice from ever melting
B. The crystalline structure of ice is less dense than water
During the wintertime, water molecules begin to get locked into a crystal-like lattice structure (shown below in (a)) of hydrogen bonds, resulting in the formation of ice. As the H-bonds become more structured, ice becomes less dense than liquid as water molecules get spaced further apart causing ice to float (shown below in (b)).
The ability for a pond to form an ice surface as a result of it having a lower density as a solid than as a liquid is a key factor in the suitability of the environments required for life.
Furthermore, over time, if ice began to sink, all the ponds, lakes and even the oceans would freeze, making life as we know it on Earth impossible.
In plants, the combination of the attraction between water molecules and the attraction between water molecules and the surface of vessels allows for the movement of water from the roots to the leaves against gravity. Which of the following terms best explains this phenomenon?
A. Crystal structure of H2O
B. High Heat Capacity
C. Capillary action
D. Osmosis
E. Dipoles of H2O
C. Capillary action
In this question, capillary action (as shown in the images below) can be defined as the ascension of water from the plant roots to leaves against the force of gravity due to the adhesive forces between water molecules and the plant cell walls and the cohesive forces between water molecules.
In plants, the attraction between water molecules and the xylem allows for the movement of water against gravity. Which of the following terms best explains why?
A. Adhesion
B. Cohesion
C. Surface tension
D. Osmosis
E. Dipoles of H2O
A. Adhesion
Adhesion is known as the clinging of one substance to another. Adhesion of water molecules to the xylem by the formation of hydrogen bonds helps counter the downward pull of gravity, as shown below:
The capillary action of water is related to both:
A. Surface tension and gravity
B. Surface tension and adhesion
C. Cohesion and adhesion
D. Cohesion and gravity
E. Osmosis and gravity
C. Cohesion and adhesion
As a result of water’s polar covalent bonds, water has the ability to form hydrogen bonds with itself and other neighboring polar molecules. Capillary action occurs as a result of both water’s cohesive nature i.e., the force that holds water molecules together, along with its adhesive nature i.e., the ability to “stick” to other polar molecules, as shown below:
Marine animals can live in large water bodies despite weather changes. Which of the following best explains why?
A. High heat capacity of water
B. Low heat capacity of water
C. Cohesion property of water
D. Adhesion property of water
E. Solvability of water
A. High heat capacity of water