Biochem Exam 3: Regulation Of OxPhos Flashcards

1
Q

How do electrons flow in the ETC when looking at redox potential?

A

Lower redox potential to highest redox potential

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2
Q

T/F

Change in redox potential (E) and change in energy (G) are inversely related

A

True

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3
Q

What 2 factors constitute a proton-motive force (PMF) to drive ATP synthesis by complex V?

A
  1. PH gradient

2. Membrane potential

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4
Q

What 3 postulates does the chemiosmotic theory consist of?

A
  1. Mitochondrial electron transport chain translocates protons across the inner mitochondrial membrane
  2. ATP synthase uses pmf to drive phosphorylation
  3. Inner mitochondrial membrane is impermeable to H+ & OH- ions.
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5
Q

What type of structure is the ATP synthase (complex V)?

A

Ball and stick

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6
Q

This subunit is the stick subunit embedded in membrane (has proton channel). What subunit is it?

A

Fo

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7
Q

This subunit is the ball subunit; it protrudes into the matrix side (contains catalytic domains). What subunit is it?

A

F1 subunit

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8
Q

What is the F1 subunit made of in ATP synthase?

A

Alpha 3, beta 3, gamma, delta, epsilon

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9
Q

How are the alpha and beta arranged in the ATP synthase F1 subunit?

A

Alternating in a hexameric ring

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10
Q

Which part of F1 subunit is catalytically active?

A

Beta

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11
Q

What is the stalk of the F1 subunit made of?

A

Gamma and epsilon

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12
Q

Which of the stalk extends down into the alpha, beta hexamer in ATP synthase for subunit F1?

A

Gamma (long helical coil)

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13
Q

What part of the mitochondria allows for the proton gradient to be near ATP synthase?

A

Cristae

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14
Q

T/F

Oligomycin helps ATP synthase (complex V)

A

False!

Oligomycin disrupts proton transport though the channel

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15
Q

How many protons need to travel through the ATP synthase?

A

4;

3 to spin it and one to pair with ADP

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16
Q

What is the ATP & ADP carrier?

A

ATP-ADP translocaase family (located in outer and inner membrane)
-Coupled together

17
Q

What are the two shuttle system for NADH across the mitochondrial membrane?

A
  1. Malate-Aspartate shuttle

2. Glycerophosphate shuttle

18
Q

Where does the malate-Aspartate shuttle happen?

A

Heart, liver, and kidneys

19
Q

Where does the malate-Aspartate shuttle release NADH into the ETC?

20
Q

Where does the glycerophosphate-shuttle happen?

A

Skeletal muscle and brain

21
Q

Where does it release it’s compound (FADH2) in the ETC?

A

CoQ & pyruvate to the TCA(complex II)

22
Q
What inhibits complex 1:
A. Amytal Rotenone Myxothiazol Piercidin A
B. Malonate
C. Antimycin
D. Co, cyanide, H2S
E. Oligomycin
A

A. Amytal, Rotenone, Myxothiazol, Piericidin A

23
Q
What inhibits complex 2:
A. Amytal, Rotenone, Myxothiazol, Piericidin A
B. Malonate
C. Antimycin
D. Co, cyanide, H2S
E. Oligomycin
A

B. Malonate

24
Q
What inhibits complex 3:
A. Amytal, Rotenone, Myxothiazol, Piericidin A
B. Malonate
C. Antimycin
D. Co, cyanide, H2S
E. Oligomycin
A

C. Antimycin

25
``` What inhibits complex IV: A. Amytal, Rotenone, Myxothiazol, Piericidin A B. Malonate C. Antimycin D. Co, cyanide, H2S E. Oligomycin ```
D. CO, Cyanide, H2S
26
``` What inhibits complex 5: A. Amytal, Rotenone, Myxothiazol, Piericidin A B. Malonate C. Antimycin D. Co, cyanide, H2S E. Oligomycin ```
E. Oligomycin
27
How does 2,4-dinitrophenol inhibit ATP synthase?
Dissipates the proton gradient
28
How does atractyloside and bongkrekic acid inhibit ATP synthase?
Inhibit ATP-ADP translocase
29
In cancers ATP syntase is upregulated. It facilitates the switch from aerobic to anaerobic respiration. This is known as what effect?
Warburg
30
What is the inner mitochondrial membrane’s uncoupling protein?
UCP 1 aka thermogenesis
31
What happens when protons flow down UCP1 instead of the ATP synthase complex?
Generates heat
32
What role does uncoupling reaction play in everyday life?
Energy homeostasis
33
Why is DNP (Nitrogenphenol) called the “nope” drug?
It bypasses ATP synthase and produces heat