BIO6 Flashcards

BIO6

1
Q

DeepMind’s AlphaFold is known for its breakthrough in which area?

A

AlphaFold achieved a breakthrough in predicting 3D protein structures.

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2
Q

Which data type often requires AI and big data techniques for analysis in proteomics?

A

Proteomics generates complex data needing AI for detailed analysis.

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3
Q

How do neural networks help in predicting protein structures?

A

Neural networks learn sequence patterns to predict protein shapes.

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4
Q

Why is big data crucial for protein-protein interaction studies?

A

Big data enables comprehensive mapping of protein interactions.

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5
Q

Which database is commonly used for retrieving protein structures for AI modeling?

A

The Protein Data Bank (PDB) is commonly used in AI modeling.

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6
Q

What is the main challenge of protein folding that AI aims to tackle?

A

AI tackles the complexity of predicting protein 3D structures from sequences.

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7
Q

What feature do deep learning models in protein science use for sequence pattern recognition?

A

Deep learning models use sequence and structure patterns for recognition.

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8
Q

Describe the relationship between Artificial Intelligence (AI), Machine Learning (ML), and Deep Learning (DL).

A

AI encompasses ML, which includes DL as a specialized subset.

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9
Q

What is the advantage of transfer learning in protein prediction tasks?

A

Transfer learning saves time by using pre-trained models for new tasks.

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10
Q

What is a pitfall when training AI models on biased protein databases?

A

Bias in databases can lead to AI models with limited generalizability.

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11
Q

How do Supervised, Unsupervised, and Reinforcement Learning differ?

A

Supervised uses labeled data, unsupervised finds patterns, reinforcement learns via feedback.

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12
Q

What describes Neural Networks in Machine Learning?

A

Neural Networks are layered models that learn from input data patterns.

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13
Q

What is overfitting in machine learning models?

A

Overfitting occurs when a model performs well on training but poorly on new data.

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14
Q

Why is data split into training, validation, and test sets in machine learning?

A

Splitting data helps evaluate model performance and prevent overfitting.

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15
Q

What role does the ‘attention’ mechanism play in deep learning models like Transformers?

A

Attention helps models focus on important parts of the input sequence.

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16
Q

How does the ‘denoising diffusion’ model operate in deep learning?

A

The denoising diffusion model removes noise to improve data clarity.