Basic Bacteriology Flashcards
Many guests, especially the elderly, have developed high fever and pneumonia after staying in a hotel with central AC. What medium is used to culture the causative organism?
Charcoal yeast extract agar buffered with cysteine and iron (the causative organism is Legionella)
What is typically found in the core of a bacterial spore?
Dipicolinic acid
What is the chemical composition of an endotoxin?
Lipopolysaccharide (LPS)
A painless black ulcer develops on the arm of a 56-year-old goat herder. What unique molecule does the capsule of the bacterium contain?
Poly-D-glutamate, which is only found in Bacillus anthracis (diagnosis: cutaneous anthrax)
In endotoxin-based complement activation, which complement(s) cause(s) hypotension/edema and histamine release?
C3a and C5a
What bacterial structural appendage, composed of protein, is known to help provide motility?
Flagellum
In the microbiology lab you find bacteria that produce yellow “sulfur” granules (sand). What are the granules made of?
Bacterial filaments; the bacteria are Actinomyces israelii (Israel has yellow sand)
Bacteria with thin peptidoglycan layers turn what color(s) with counterstain on Gram staining?
Red or pink, and are gram ⊖
After examining a patient suspected of having Clostridium difficile infection, you clean your hands with soap and water rather than the alcohol sanitizer. Why?
Spore-forming bacteria ( like Bacillus and Clostridium) are resistant to alcohol and can only be killed with soap and water
Which spirochete can be identified with Giemsa stain?
Borrelia
An elderly woman is vaccinated only against nonconjugated polysaccharide antigens. Why is this patient at greater risk for infection when compared to conjugated vaccines?
Polysaccharide antigens alone are not presented to T cells; this prompts a weaker immune response, in comparison to conjugated vaccines
On what part of the CNS does the Clostridium tetani toxin tetanospasmin act?
Renshaw cells in the spinal cord (toxin prevents release of inhibitory neurotransmitters, leading to spastic paralysis)
How does an indicator (differential) medium work? Give an example of such a medium.
A color change results in response to some organisms’ metabolites; Escherichia coli changes color on MacConkey agar (pH indicator) due to lactose conversion to acidic metabolites
What are the commonly encountered spore-forming bacteria, and what diseases do they cause?
Bacillus & Clostridium: B anthracis (anthrax), B cereus (food poisoning), C botulinum (botulism), C difficile (pseudomembranous colitis), C perfringens (gas gangrene), C tetani (tetanus)
A patient has a cough, and a culture grows a gram ⊖ rod that has a positive silver stain. What is the most likely pathogen?
Legionella
What color pigment does Pseudomonas aeruginosa produce?
Blue-green (aeruginosa: aerugula is green)
Shigella and enterohemorrhagic Escherichia coli share a mechanism for causing gastrointestinal mucosal damage and dysentery. What is it?
Both Shiga toxin and Shiga-like toxin cleave host cell rRNA, inactivating the 60S ribosomal subunit by removing adenine from rRNA
What are endotoxins composed of?
The lipid A component of lipopolysaccharide (a bacterium’s structural part); lysis releases it
What stain is useful to identify Tropheryma whipplei in a patient suspected to have Whipple disease?
Periodic acid-Schiff stain, that stains glycogen, and mucopolysaccharides (PaSs the sugar)
One type of conjugation process does not involve the transfer of chromosomes. How does it work?
In F+ to F- conjugation, plasmids are transferred from the F+ cell through a conjugal bridge; no chromosomal DNA is transferred
In which component of the cell envelope are oxidative and transport enzymes located?
Cytoplasmic membrane
A gram-positive bacterium produces offspring with a special keratin-like coat. How do these offspring survive?
By resisting dehydration, heat, and chemicals (the offspring are spores)
Cholera toxin is encoded in a phage. Describe how the phage helps the toxin gene undergo transduction.
A lysogenic phage infects bacteria, inserts viral DNA into chromosomes; viral (and bacterial) DNA are excised into the capsid and can infect other bacteria
A patient presents with contact lens-associated keratitis. What biofilm-producing bacteria are the cause?
Pseudomonas aeruginosa
A man is infected with bacteria that produce exotoxin A, which induces host cell death. Identify the pathogen and the mechanism of exotoxin A.
The pathogen is Pseudomonas aeruginosa; exotoxin A inactivates elongation factor (EF-2) to trigger host cell death
In a culture plate, some colonies representing enteric bacteria turn pink. What medium was used to identify the bacteria?
MacConkey agar, which is used to identify lactose-fermenting enterics (eg, Escherichia coli)
Chlamydia do not Gram stain well because they are intracellular and have ↓ levels of what acid in their cell wall?
Muramic acid, resulting in suboptimal staining of peptidoglycan
A patient presents with struvite stones. What is the underlying biochemical reaction that leads to the formation of such stones?
Urease hydrolyzes urea, with release of ammonia and CO2; the increased urine pH encourages ammonium magnesium phosphate stone formation
Escherichia coli grows on MacConkey agar, producing a color change. Describe the medium and how it works.
MacConkey agar is a pH indicator (or differential) medium; it responds with a color change after conversion of lactose to acidic metabolites by E coli
Name 3 toxins produced by Staphylococcus aureus and their associated symptoms.
Toxic shock syndrome toxin (symptom: rash, fever, shock); exfoliative toxin (symptom: scalded-skin syndrome); enterotoxin (symptom: diarrhea, vomiting)
Identify the chemical composition and the 2 main functions of the peptidoglycan layer in bacteria.
It has a sugar backbone with cross-linked peptide side chains; it provides rigid support and protection against osmotic pressure damage
In a gram-positive bacterium you identify a specialized structure composed of dipicolinic acid and peptidoglycan. What is it?
A Spore
Diagnostic test for rheumatic fever uses antibodies against what part of the causative agent?
Antibodies against Streptococcus toxin, streptolysin O (anti-streptolysin O)
How do the cell walls of gram ⊕ and gram ⊖ bacteria compare?
Gram ⊕: thick peptidoglycan layer and lipoteichoic acid Gram ⊖: thin peptidoglycan layer, porin, endotoxin, lipopolysaccharide, and periplasmic space
Name 5 bacterial toxins coded for in a lysogenic phage.
Group A strep erythrogenic toxin, Botulinum toxin, Cholera toxin, Diphtheria toxin, Shiga toxin (ABCD’S)
Deoxyribonuclease is added to a Petri dish growing Neisseria. Which process of gene transfer among bacteria will be halted?
Transformation (deoxyribonuclease lyses the naked DNA, thus preventing transformation)
A man with an Escherichia coli infection has significant fever, hypotension, and edema. What component of the bacteria is responsible for his symptoms?
Lipopolysaccharide (LPS) in the outer membrane of gram ⊖ bacteria (eg, E coli); activates macrophages, complement, and tissue factor
Which strain of Escherichia coli has a toxin that overactivates adenylate cyclase?
Enterotoxigenic E coli (heat-labile toxin)
A male patient with many sexual partners has purulent penile discharge from Neisseria gonorrhoeae. How is the causative organism cultured?
On Thayer-Martin agar, a selective medium containing vancomycin, trimethoprim, colistin, and nystatin (antibiotics that inhibit the growth of other organisms except for Neisseria)
A 20-year-old military recruit has a headache and cough caused by Mycoplasma. Why do these bacteria not Gram stain well?
Mycoplasma species do not have cell walls
A patient receives a pneumococcal conjugate vaccine (PCV). How does a PCV work to promote a T-cell response?
In encapsulated bacteria vaccines, protein and polysaccharide are conjugated to promote a T-cell response and class switching as a result
A patient with pneumonia is receiving ventilatory assistance. This patient is at risk for infection with which biofilm-producing bacteria?
Pseudomonas aeruginosa
Name 4 aerobes.
Nocardia, Pseudomonas aeruginosa, Mycobacterium tuberculosis, Bordetella pertussis
Coxiella is considered an obligate intracellular pathogen. How does this organism get energy?
It obtains ATP from its host cell
Where are genes coding for the exotoxin of the bacteria located?
In the plasmid or bacteriophage
How does Thayer-Martin agar work in the infectious disease lab to test for Neisseria?
It is a selective medium (contains antibiotics that permit selective growth of Neisseria by preventing the growth of other organisms)
What is the chemical composition of the bacterial cytoplasmic membrane, and what are the membrane’s 2 main enzymatic functions?
The membrane comprises a phospholipid bilayer with embedded proteins; its main enzymatic functions are oxidation and transportation
A patient with lockjaw tests ⊕ for tetanospasmin. Low activity of what neurotransmitters underlies the patient’s symptoms?
Glycine and GABA; tetanospasmin blocks inhibitory release by cleaving SNARE proteins, which mediate vesicle fusion (the diagnosis is tetanus)
Your microbiology lab advisor wishes to use a special silver stain. What organisms may he be looking for?
Legionella, Helicobacter pylori, or fungi (eg, Coccidioides, Pneumocystis jirovecii)
A 10-year-old girl has a severe cough that is accompanied by an inspiratory whoop. What is the mechanism of the offending toxin?
Bordetella pertussis disables the Gi protein (overactivates adenylate cyclase), impairing phagocytosis and allowing bacteria to survive
Anaerobic bacteria usually smell bad, are difficult to culture, and produce CO2 and H2 in tissue. What causes the foul smell?
Short-chain fatty acids
Two plates grow the same lactose-fermenting bacteria. One is pink; the other has a green metallic sheen. What medium was used on each plate
Escherichia coli turns MacConkey agar pink; E coli also grows colonies with a green metallic sheen on eosin-methylene blue (EMB) agar
A patient has otitis media. What biofilm-producing bacteria are most likely responsible for the infection?
Nontypeable (unencapsulated) Haemophilus influenzae
In a patient with acute rheumatic fever, what bacterial virulence factor may be responsible for the autoimmune response?
M protein by group A streptococci; it has epitopes (antigenic targets) similar to those of human cellular proteins, a phenomenon known as molecular mimicry
In what scenario is a fluorescent antibody stain typically used?
To confirm syphylis (FTA-ABS); it can also be used to identify many bacteria and viruses, Pneumocystis jirovecii, Giardia, and Cryptosporidium
Which type of transduction does not retain the altered DNA in the subsequent generations of the bacteria?
Generalized transduction (phage DNA is not incorporated into the chromosome, and bacterial cell is lysed afterward)
An Escherichia coli infection overactivates cellular guanylate cyclase. Describe the mechanism by which the responsible toxin causes diarrhea.
Heat-stable toxin of enterotoxigenic E coli (ETEC) ↓ reabsorption of NaCl and water in the gut
In the microbiology lab, you notice that some Sabouraud agar is growing pathogens. What is likely growing
Fungi (Sab’s a fun guy!)
A febrile man with septic shock has poorly antigenic toxins in his blood found on the outer cell membrane of gram ⊖ bacteria. Induction of which cytokines caused this condition?
TNF, IL-1, and IL-6 (induced by endotoxin)
Immunoglobulin (Ig) A protease allows bacteria to colonize mucous membranes. Describe its mechanism of action.
IgA protease cleaves IgA, allowing bacteria to adhere to mucous membranes
What are exotoxins composed of?
Polypeptides
Legionella, Bartonella, and Ehrlichia all share what property that makes them suboptimal for Gram stain?
They are all primarily intracellular bacteria
In patients with Pseudomonas infections, how does the catalase enzyme make these bacteria more pathogenic?
Catalase degrades H2O2 → H2O and O2 before myeloperoxidase can convert it to microbicidal products
A man presents with a new heart murmur after a recent bout of pharyngitis. What would confirm the most likely diagnosis?
The presence of anti-streptolysin O (ASO) antibodies (he likely has rheumatic fever)
Where in the cell wall of gram ⊖ bacteria are β-lactamases located?
The periplasmic space, which is only present in gram ⊖ bacteria
What is the difference between pneumococcal vaccines PCV13 and PPSV23 vaccines?
PCV13 is a cojugate vaccine, whereas PPSV23 is a pneumococcal polysaccharide vaccine with no conjugated protein (hence has weaker immune response)
Name 2 bacterial disease that are typically caused by endotoxins.
Gram ⊖ rod sepsis and meningococcemia
How will Ureaplasma present on Gram stain?
No staining; Ureaplasma lack a cell wall (similar to Mycoplasma) and do not Gram stain well
What cheaper and sensitive stain is used in lieu of the Ziehl-Neelsen stain to screen for acid-fast bacteria?
Auramine-rhodamine stain
Where are genes coding for the endotoxin of the bacteria located?
Bacterial chromosome