Analyzing Cells, Molecules And Systems 2 Flashcards

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1
Q

HindIII Characteristics

A
  • Creates 4 “Sticky” ends

- Cleaves AA sequence in the AAGCTT sequence
5’-3’

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2
Q

Purpose of DNA Microassays?

A

Used to determine the overall change in gene expression b/w 2 samples

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3
Q

Cool thing about DNA Libraries

A
  • Every gene in the human body can be put into bacteria
  • Can be stored
  • Can be INDEFINITELY propagated at anytime
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4
Q

EcoRI Characteristics

A
  • Creates 4 “sticky” ends

- Cleaves before the AATT sequence
5’-3’

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5
Q

Purpose in Detection variances in DNA sequences

A
  1. Forensics
  2. Diagnostics
    - Pre-Natal
    - Newborn screening
    - Genetic carriers
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6
Q

PCR Products at the end of the

  • 1st cycle
  • 2nd cycle
  • 3rd cycle
A
  1. 2
  2. 4
  3. 8
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7
Q

The main Restriction Endonucleases

A
  1. HaeIII
  2. EcoRI
  3. HindIII
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8
Q

Genomic Library vs cDNA Library

A

Genomic:

  • Contains introns
  • produces DNA fragments

cDNA:

  • No introns
  • Much smaller than original gene
  • Req Reverse transcriptase
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9
Q

Purpose of PCR

A
  • Amplify Isolated DNA regions
  • Need Primers
  • Heat to anneal then cool to replicate
  • Earlier detection of microorganisms
    (HIV, bacterial and fungal infection)
  • Detection of Specific genetic mutations
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10
Q

T/F: Genes can be cloned using Bacteria.

A

True

  • W/ the use of PLASMIDS
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11
Q

RFLP is also called what?

A
  • DNA finger printing

- DNA typing

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12
Q

HaeIII Characteristics

A
  • Cleaves straight Down at a GGCC site

5’-3’

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13
Q

Why is Short Tandem Repeats (STRs) interesting?

A

Most individuals have VARYING repetitive regions of DNA sequences

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14
Q

Ligaments Rxn req. ___ to work.

A

ATP

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15
Q

What is Quantitative PCR?

A

Used to Quantify copy number of a specific gene in 2+ samples in real time

  • Includes a PROBE which fluorescent only in the presence of the PCT Product
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16
Q

Diff b/w Gel Electrophoresis and SDS Page

A

Gel:

  • Analyzes DNA
  • DNA already Negative

SDS:

  • Separates Proteins
  • Needs to Negatively charge them first
17
Q

What is Quantitative PCR used for?

A
  • Detect Levels of infectious agent

- Determine levels of gene expression

18
Q

How can you glue 2 fragments that were cus w/ diff restriction nucleases?

A
  • DNA Poly + dNTPs

- Ligase + ATP

19
Q

Restriction Endonuclease

A
  • Enzymes isolated from Bacteria

- Cut DNA at Specific sites

20
Q

3 detections of variations in DNA sequences

A
  1. Restriction Fragment Length Polymorphism
    (RFLP)
  2. Variable Number of Tandem Repeats (VNTR)
  3. Short Tandem Repeats (STR)
21
Q

How can HIV be diagnosed?

A

PCR