Analytical Techniques Flashcards

1
Q

Define isoelectric point.

A

pH at which the amino acid has a net charge of zero (aka as a zwitterion).

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2
Q

In chromatography, what is the mobile phase?

A

A liquid or gas that carries the sample molecules along the column or TLC plate

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3
Q

Describe three features of the structure of DNA that X- ray crystallography helped Rosalind Franklin identify.

A

Any of: DNA forms a double helix, DNA is double stranded, Twists very 3.4 nm, 10 basepairs/twist. phosphate grps on the outside of double helix

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4
Q

In chromatography, what is the stationary phase?

A

Solid particles to which the sample molecules adsorb

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5
Q

Gel electrophoresis separates proteins on the basis of what two factors?

A

Size and charge

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6
Q

A hexagon shape present in X-ray crystallography indicates?

A

Benzene ring

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7
Q

In mass spectroscopy, what does the M+1 peak indicate?

A

The presence of carbon 13 isotopes.

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8
Q

In mass spectroscopy, what does the M+2 peak indicate?

A

The presence of a halogen.

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9
Q

Identify two factors that affect the overall charge on a protein

A

The type of amino acids
in the polypeptide
chain and the pH of the
chemical environment

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9
Q

The key information gained from IR spectroscopy is?

A

Functional groups present

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9
Q

In mass spectroscopy, what does the M peak indicate?

A

Molecular mass of the molecular ion.

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10
Q

True or False? Electron density maps can not be created from X-ray diffraction patterns.

A

False

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11
Q

Name the two types of stretching vibration modes in IR spectroscopy

A

Symmetric and antisymmetric stretching

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12
Q

True or False? Strongly polar bonds produce weak bands in an IR spectrum

A

False

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12
Q

True or false? A cationic exchange column has a negatively charged stationary phase (solid support)

A

True

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12
Q

TRUE or FALSE? The longer the protein sample is in the chromotography column the higher the retention time.

A

True

13
Q

True or False? All
bond types, polar and
non-polar, will give
rise to a band in an IR
spectrum

A

False IR active bonds must be polar

13
Q

True or False? The strength with which proteins bind to the solid support in a cationic exchange column is determined by the relative degree of negative surface charge on each different protein.

A

True

14
Q

True or FALSE? A substance to be
separated by TLC that is strongly attracted to the stationary phase will travel more slowely than a substance that is not strongly attracted.

A

True

15
Q

True or False? Weakly
polar bonds produce
weak bands in an IR
spectrum.

A

True

16
Q

What does a peak at 15m/z in mass spectroscopy indicate?

A

Methyl fragment CH3+

17
Q

What does a peak at 29 m/z in mass spectroscopy indicate?

A

Ethyl fragment CH3CH2+ or aldehyde CHO+

18
Q

What is the amino acid charge if the pH<pI?

A

Negative

19
Q

What is the amino acid charge if the pH>pI

A

Positive

20
Q

Where is the fingerprint region of an IR spectrum located?

A

From around 1500 - 600 cm-1