Amino Acid and Protein Properties Flashcards
All amino acids have…
Carboxylic acid group (acidic) and amine group (basic)
Class: Basic AAs
NH3+ (–> NH2)
Class: Acidic AAs
COOH (–>COO-)
Class: Alcohol AAs
C-OH
Class: Aromatic AAs
aromatic side group
Class: Aliphatic AAs
hydrocarbon
Class: Amides AAs
O=C-NH2
Class: Sulfur-containing AAs
C-SH or C-S-C
Which classes of AAs exhibit van der waals interactions?
Aromatic, Aliphatic, and Methionine (C-S-C)
Which classes of AAs exhibit ionic bonds?
Acidic and Basic
Which classes of AAs exhibit H-bonding?
Alcohols and Amides (C-NH2)
Which classes of AAs exhibit dipole-dipole bonds?
Alcohols and Amides (C=O)
Which classes of AAs exhibit disulfide bridges?
Cysteine (C-SH)
Which classes of AAs are hydrophobic?
aliphatic, aromatic, sulfur-containing
Which of the classes of AAs are hydrophilic?
basic, acidic, alcohols, amides
In a titration curve, where is the pKa?
half way point to the equivalence point
What is the equivalence point in a titration?
The point where the moles of acid and base are equal
Which 2 AAs are good buffers at physiological pH?
Cysteine and Histidine
_____ are good at buffering acids
acids/molecules with pKas below pH
_____ are good at buffering bases
bases/molecules with pKas above pH
Isoelectric point
pH at which a molecule has an equal number of positive and negative charges
Zwitterion
half charged, half neutral groups