Amino Acid and Protein Properties Flashcards

1
Q

All amino acids have…

A

Carboxylic acid group (acidic) and amine group (basic)

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2
Q

Class: Basic AAs

A

NH3+ (–> NH2)

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3
Q

Class: Acidic AAs

A

COOH (–>COO-)

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4
Q

Class: Alcohol AAs

A

C-OH

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5
Q

Class: Aromatic AAs

A

aromatic side group

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6
Q

Class: Aliphatic AAs

A

hydrocarbon

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7
Q

Class: Amides AAs

A

O=C-NH2

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8
Q

Class: Sulfur-containing AAs

A

C-SH or C-S-C

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9
Q

Which classes of AAs exhibit van der waals interactions?

A

Aromatic, Aliphatic, and Methionine (C-S-C)

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10
Q

Which classes of AAs exhibit ionic bonds?

A

Acidic and Basic

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11
Q

Which classes of AAs exhibit H-bonding?

A

Alcohols and Amides (C-NH2)

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12
Q

Which classes of AAs exhibit dipole-dipole bonds?

A

Alcohols and Amides (C=O)

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13
Q

Which classes of AAs exhibit disulfide bridges?

A

Cysteine (C-SH)

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14
Q

Which classes of AAs are hydrophobic?

A

aliphatic, aromatic, sulfur-containing

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15
Q

Which of the classes of AAs are hydrophilic?

A

basic, acidic, alcohols, amides

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16
Q

In a titration curve, where is the pKa?

A

half way point to the equivalence point

17
Q

What is the equivalence point in a titration?

A

The point where the moles of acid and base are equal

18
Q

Which 2 AAs are good buffers at physiological pH?

A

Cysteine and Histidine

19
Q

_____ are good at buffering acids

A

acids/molecules with pKas below pH

20
Q

_____ are good at buffering bases

A

bases/molecules with pKas above pH

21
Q

Isoelectric point

A

pH at which a molecule has an equal number of positive and negative charges

22
Q

Zwitterion

A

half charged, half neutral groups