Week 7: Questions Flashcards

1
Q

Dr. Allsion noticed that in lowlands and wet areas there was a higher presence of mosquitos and there was a higher incidence of the sickle cell trait, whereas in highlands and dry areas there was a lower presence of mosquitos and lower incidence of the sickle cell trait

A

Hypothesis: the sickle cell trait provides resistance against the malaria parasite

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2
Q

Dr. Allison tested his hypothesis in three studies

A
  1. Used participants that were involved in a malaria drug trial by using their blood sample
    - Found that 14/15 of the participants who did not have the sickle cell trait did get malaria, whereas the 1/15 participant who did have the trait did not get it
  • Although these results were consistent with the hypothesis, Dr. Allsion realized that those who lived in mosquito infested areas may have built an immunity to P. falciparum
  1. To address the issue with the previous study, Dr. Allison collected blood samples from children in the area and looked examined for the presence/absence of the sickle cell trait as well as if it contained P. falciparum
  • Found that P. falciparum was present in 28% of children who had the sickle cell trait, but 46% of children who didn’t have it
  • The children without the trait also had a higher number of parasites present

Collected blood samples from individuals from 30+ tribes across Africa

  • Found that in all locations, the sickle cell trait was rare in locations where malaria was absent and common where malaria was an issue
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3
Q

What is the function of hemoglobin in your body?

A

To carry oxygen in red blood cells

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4
Q

Sickle cell disease is the result of defective Hemoglobin proteins (HbS rather than the normal HbA). What causes HbS to appear in a person?

A

HbS forms long filaments when oxygen levels are low, which deforms the cells

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5
Q

A person can be a “carrier” of sickle cell but not have the disease. How is this possible?

A

This is because the sickle cell trait is inherited, if an individual inherits one normal gene and one sickle gene, they are only a carrier

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6
Q

Why do some groups of people in Africa have a relatively high percentage of individuals with sickle cell disease?

A

This is because it is an evolutionary trait that they developed in response to malaria

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7
Q

Electrophoresis

A

is a method used to separate mixtures of molecules (ie. proteins, DNA, RNA)

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8
Q

Pauling found that:

A

Two types of haemoglobin are different chemically

Sickling occurs in low oxygen

The type of hemoglobin in an individual is related to genetics

The cause of the disease could be traced to an alteration in the molecular structure of a protein (in HbS the amino acid in position 6 is valine instead of glutamic acid like it is in HbA, which results in the abnormal protein that causes a disease)

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9
Q

In electrophoresis which type of molecules will move the farthest from the well?

A

The smaller DNA segments

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10
Q

Why do molecules move through the gel in electrophoresis?

A

Because the gel is negatively charged so the DNA will migrate towards the positively charged end.

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11
Q

If pangenesis was how inheritance worked, and you crossed a white flower with a red flower, what colour would the offspring be?

A

It would be pink because it would take the white colour and red colour “seed” from each flower and blend this characteristic in the offspring

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12
Q

Meiosis

A

Meiosis sorts genes into gametes which fuse upon fertilization, when genes from the mother and father are brought together again

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13
Q

Mendel’s Rules

A
  1. Genes can come in more than one form (allele)
  • Ex. gene for hemoglobin can be a normal or sickle cell allele, which encodes for HbA or HbS, a pea flower colour gene can be either a purple or white allele
  1. The alleles of a gene sort individually into gametes during meiosis
  • Ex. a person who is a carrier of sickle cell disease will make gametes and 50% will have normal hemoglobin allele while the other 50% will have the sickle cell allele, a pea with a purple allele and white allele would produce gametes each possessing each of these alleles
  1. A trait is exhibited as dominant or recessive
  • Ex. pea flower colour is a trait that exhibits dominant/recessive relationship between the purple and white alleles. Purple is the dominant trait (the one seen when both alleles appear together). When purple and white are present together, the two different alleles produce a flower as purple as one developed by a plant with two purple alleles because white is not seen (recessive trait)
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14
Q

The presence of horns on Hereford cattle is controlled by a single gene. The hornless condition (H) is dominant over the horned (h) condition. A hornless cow was crossed repeatedly with the same horned bull. The following results were obtained in the offspring:

8 hornless calves
7 horned calves

What are the alleles of the parents?

A

Hh

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15
Q

In human beings, brown eyes are dominant over blue eyes. Suppose a blue-eyed man marries a brown-eyed woman whose father was blue-eyed. What proportion of their children would you predict should have blue eyes?

A

25%

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16
Q

A brown-eyed man whose father was blue-eyed and whose mother was brown-eyed married a blue-eyed woman whose father and mother were both brown-eyed. The couple has a blue-eyed son. For which of the individuals can you be sure of their genotypes? What genotypes are possible for the others?

A

The second generation is Bb (man) and Bb (woman) and the third generation is bb (son)

The first generation could have been bb (father) and BB (mother)

17
Q

Inconsistencies with Mendel’s rules

A

alleles and genes can interact, genes do not always affect just one characteristic and gene expression depends on the environment

Interactions between alleles are more common than dominant or recessive alleles

A single gene can affect multiple traits

18
Q

A and T combine, G and C combines (no other combo works)
Given the following strand of DNA write the nucleotide sequence for the complementary strand: ATCCCTAGGT

A

TAGGGATCCA

19
Q

It took two steps to figure out the physical basis of genes

A
  1. Griffith found a substances in bacteria that could transform how other bacteria function to cause disease
  • While studying a species of bacteria, he found that bacteria came in two forms: smooth and rough
  • Found that transformation (dead smooth bacteria alters lively rough bacteria) occurred and this is what caused pneumonia
  • Discovered this change in bacteria was heritable
  1. Avery, MacLeod and McCarty demonstrated DNA was responsible for the transformation
20
Q

DNA has three characteristics:

A
  1. It must replicate itself (process of replication)
  • The double helix of DNA unzips and new strands form
  1. It must be able to mutate
  • Deletion: removes a segment from the chromosome
  • Duplication: repeats a segment
  • Inversion: reverses a segment within a chromosome
  • Translocation: moves a segment from one chromosome to another
  1. It must produce the proteins responsible for physical changes (process of protein production)

The genetic code: the language of nucleotides which consists of the alphabet (A,T,C,G) and words (a nucleotide triplet). Each nucleotide triplet corresponds to a specific amino acid that will be incorporated into a protein, and the max number of triplets possible is 64 (only four nucleotides can be present in any sequence of three)

Transcription: the process of copying or transcribing genetic material from DNA into RNA. DNA does not leave the nucleus, so its information has to be transported to the cytoplasm. The DNA info is transcribed (complementary base pairing rule with RNA; A to U, G to C)) and RNA detaches and moves to the cytoplasm

Translation: the process where information in RNA is converted to a new language (amino acid sequences) by the three types of RNA; mRNA (the sequences which are made of nucleotide triplets aka codons identify which amino acids should be joined together/in what order), tRNA (a carrier molecule which has a nucelotide triplet sequence aka anticodon on one end and a binding site where an amino acid is attached on the other end and this carries specific amino acids requested by mRNA codons) and rRNA (forms ribosomes which hold mRNA and tRNA in the right place so that amino acids can be connected)

21
Q

Why is it easy for a DNA molecule split down the middle to reform in an exact replica of itself?

A

Each of the bases will only pair with one other base

22
Q

Given the following small piece of DNA, which is part of a longer strand, fill in the correct nucleotides for the mRNA and the amino acids in the protein.
DNA: CCAATAGCGCT

A

mRNA: CCAAUAGCGCU
Amino acid sequence: Pro Iie Ala

23
Q

In a protein, when one amino acid is replaced by another, the protein often can’t do its job. What changes about the protein?

A

A string of amino acids fold into the shape that is mostly chemically stable based on their shape, size and electrical charge. If the wrong amino acid (different chemical properties) is inserted, the structure changes which can lead to change in function

24
Q

Mutations are not always random, natural events. Certain things can cause DNA damage. One of these things is:

A

Mismatch of DNA bases

25
Q

Tay Sachs disease is the result of abnormal genes, much like sickle cell, and both can be identified with genetic screening. As a result of screening programs, Tay Sachs is now very rare in North America, but sickle cell is not. What’s different between these cases?

A

The Tay Sachs screening program started with good education and cultural sensitivity toward participants so people are more willing to be tested.

26
Q

If you investigate and map out the family history of a particular trait, what have you produced?

A

Pedigree analysis