week 5 Flashcards
- Lead to the transformation of one chemical substance into another
- these changes involve the movement and exchange of electrons and breaking of “old” bonds and formation of “new” bonds
- new products in reactions often become reactants in the next reaction
- metabolic pathway
- reactions are often catalyzed by enzymes
chemical reactions
in biochemistry, a sequence of reactions is called
metabolic pathway
- reactions proceed through a sequence of transition states
- sometimes between transition states, intermediate products form
- reactions end with a stable end product
- entire series is referred to as a reaction sequence
the “in between”
the place in a chemical reaction that corresponds to the highest energy point in a reaction diagram
- least stable point
- can’t be isolated or directly observed
transition state
real compounds that theoretically could be isolated
-reactions continues to form the most stable product
intermediates
types of chemical reactions (3)
- oxidation- reduction
2 addition - hydrolysis
reactions that involve the transfer of electrons from one species to another
oxidation-reduction reactions
atom or group of atoms is added to a molecule
addition reactions
water molecule breaks chemical bonds
hydrolysis reactions
oxidation reduction reactions (3)
- oxidation
- ethanol oxidation
- reduction reactions
- an atom is oxidized when it loses an electron
- makes atom more positive
oxidation
- most intoxicating substance in alcoholic beverages
- completely soluble in water
- all ethanol consumed is catabolized (broken down) in two steps in the liver
- conversion of ethanol to ethanal
- -transition state occurs as ethanol is oxidized into ethanal
- -acetaldehyde is oxidized to acetic acid
ethanol oxidation
- reverse of oxidation reactions
- electrons (and hydrogen) are added to carboxylic acid until an alcohol is created
reduction reactions
addition reactions (3)
- nucleophiles and electrophiles
- formaldehyde + ammonia
- methylene bridge
- 1 donates electrons
- the other accepts electrons
- when electrons are donated a new bond is formed
nucleophiles and electrophiles
- 1 is an electrophile willing to accept electrons
- amines are nucleophiles willing to donate electrons
- for carbon atom to accept electrons; it must simultaneously transfer electrons to the oxygen atom
- inital transition state occurs when _ interacts with _
- hydrogen atom moves from nitrogen -> oxygen
- intermediate product is alcohol amine
- alcohol amine then forms a compound with a carbon nitrogen double bond that is highly reactive
- final product involves the formation of methylene bridge
formaldehyde and ammonia
one carbon unit feature that forms between two nitrogen atoms present in proteins
-holds decomposing tissues and cells together
methylene bridge
hydrolysis reactions (1)
- hydrolysis
- chemical reaction that begins putrefaction
- driven by enzymes
- water is a nucleophile and interacts with electrophilic compounds to begin the putrefaction process
hydrolysis
most living matter is made up of four elements
1 hydrogen
- oxygen
- nitrogen
- carbon
4 major macromolecules
- carbs
- lipids
- nucleic acids
- proteins
water characteristics (5)
- 60% of adult mass
- polar
- forms hydrogen bonds
- excellent vehicle
- amphoteric
water in our body (3) characteristics
1 protects joints and spinal cord
- starts the digestive process
- allows our body to excrete waste
water & decomposition (2)
- hydrolysis forms new products
2. degradation of proteins leads to the formation of amino acids
a compound of hydrogen, carbon, and oxygen that is an aldehyde or ketone derivative of polyhydroxyl alcohol
- carbon water
- created via photosynthesis
- formula is Cn(H20)n
carbohydrates
functional groups of macromolecules (3)
- aldehyde or ketone derivatives of polyhydroxy alcohols
- aldose carbs have aldehyde functional group
- ketose carbs have a ketone functional group
subcategories of carbohydrates (4)
- monosaccharides
- oligosaccharides
- disaccharides
- polysaccharides
simple sugars with 3-9 carbons
- ribose
- deoxyribose
- glucose
monosaccharides
long chain of 2-10 monosaccharides linked together
oligosaccharides
a type of oligosaccharides with 2 monosaccharides
-maltose
lactose
-sucrose (most commonly purified organic chemical in the world)
disaccharides
10+ monosaccharides linked together
-stores energy in the form of glycogen
polysaccharides