Viruses Flashcards

1
Q

What is a virus?

A

A virus is a microscopic infectious agent that requires a host cell to replicate. It consists of genetic material (either DNA or RNA) encased in a protein coat called a capsid, and sometimes an additional lipid envelope.

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2
Q

What are the two main categories of viral genetic material?

A

The two main categories are DNA and RNA. Viruses can have either DNA or RNA as their genetic material, but not both.

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3
Q

What are the main classes of viruses based on their genetic material?

A

The main classes are: 1. DNA viruses (e.g., Herpesviruses, Adenoviruses) 2. RNA viruses (e.g., Influenza viruses, Coronaviruses)

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4
Q

What are the key characteristics of DNA viruses?

A

DNA viruses have DNA as their genetic material, which can be single-stranded (ssDNA) or double-stranded (dsDNA). They often replicate in the host cell’s nucleus.

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5
Q

What are the key characteristics of RNA viruses?

A

RNA viruses have RNA as their genetic material, which can be single-stranded (ssRNA) or double-stranded (dsRNA). They generally replicate in the host cell’s cytoplasm.

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6
Q

What are retroviruses and how do they replicate?

A

Retroviruses are a subclass of RNA viruses that use reverse transcription to convert their RNA genome into DNA inside the host cell. The DNA then integrates into the host genome, where it is replicated along with the host’s DNA.

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7
Q

How do enveloped viruses differ from non-enveloped viruses?

A

Enveloped viruses have a lipid bilayer derived from the host cell membrane, which surrounds their capsid. Non-enveloped viruses lack this lipid envelope and are more resistant to environmental factors.

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8
Q

What is a capsid and what role does it play in a virus?

A

The capsid is a protein shell that encases and protects the viral genetic material. It also plays a crucial role in attaching the virus to host cells and facilitating the entry of viral genetic material into the host cell.

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9
Q

What are the main types of viral symmetry?

A

Viral symmetry can be: 1. Icosahedral - A symmetrical, spherical shape with 20 triangular faces (e.g., Adenoviruses). 2. Helical - A cylindrical shape with a helical arrangement of the capsid proteins (e.g., Tobacco mosaic virus). 3. Complex - Irregular shapes that do not fit the standard categories (e.g., Bacteriophages).

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10
Q

How do bacteriophages differ from animal viruses?

A

Bacteriophages are viruses that specifically infect bacteria. They often have complex structures and inject their genetic material into the bacterial cell. Animal viruses infect eukaryotic cells and can have a wide range of structures and mechanisms for entry and replication.

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11
Q

What is the lytic cycle in bacteriophage infection?

A

The lytic cycle is a viral replication process where the bacteriophage injects its DNA into a bacterial cell, hijacks the host’s machinery to produce new viral particles, and eventually causes the host cell to burst, releasing new viruses.

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12
Q

What is the lysogenic cycle in bacteriophage infection?

A

The lysogenic cycle involves the integration of the phage DNA into the bacterial genome, where it replicates along with the host’s DNA without immediately killing the host. This integrated phage DNA is called a prophage.

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13
Q

How can viral mutations affect virus behavior and pathogenicity?

A

Mutations in viral genomes can alter the virus’s ability to infect host cells, evade the immune system, or develop resistance to antiviral drugs. This can impact the severity of disease and the effectiveness of treatments and vaccines.

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14
Q

What are some common methods used to classify viruses?

A

Common methods include classification by genetic material (DNA or RNA), replication strategy (e.g., reverse transcription), morphology (shape and structure), and host range (type of host cells or organisms they infect).

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15
Q

Why is it important to study viral classifications and structures?

A

Understanding viral classifications and structures helps in diagnosing infections, developing vaccines and antiviral drugs, and implementing effective public health measures to control viral outbreaks.

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16
Q

What is COVID-19?

A

COVID-19 is a respiratory illness caused by the SARS-CoV-2 virus, which emerged in late 2019. It can lead to symptoms ranging from mild respiratory issues to severe pneumonia and, in some cases, death.

17
Q

How is COVID-19 primarily transmitted?

A

COVID-19 is primarily transmitted through respiratory droplets when an infected person coughs, sneezes, or talks. It can also spread via contact with contaminated surfaces and, less commonly, through aerosolized particles in closed or poorly ventilated spaces.

18
Q

What are the common symptoms of COVID-19?

A

Common symptoms include fever, cough, shortness of breath, fatigue, muscle aches, loss of taste or smell, and sore throat. Some people may experience gastrointestinal symptoms or a rash.

19
Q

What are the main types of COVID-19 vaccines?

A

The main types of COVID-19 vaccines are: 1. mRNA vaccines (e.g., Pfizer-BioNTech, Moderna) 2. Viral vector vaccines (e.g., Johnson & Johnson’s Janssen) 3. Protein subunit vaccines (e.g., Novavax) 4. Inactivated or killed virus vaccines (e.g., Sinovac-CoronaVac, Sinopharm)

20
Q

How do mRNA vaccines work?

A

mRNA vaccines work by introducing a small piece of messenger RNA (mRNA) into the body. This mRNA encodes a part of the SARS-CoV-2 virus (specifically the spike protein). Cells use this mRNA to produce the spike protein, which triggers an immune response and helps protect against COVID-19.

21
Q

How do viral vector vaccines work?

A

Viral vector vaccines use a modified virus (not the SARS-CoV-2 virus) as a delivery vehicle to introduce genetic material encoding the SARS-CoV-2 spike protein into cells. The cells then produce the spike protein, which stimulates an immune response.

22
Q

How do protein subunit vaccines work?

A

Protein subunit vaccines contain harmless pieces of the SARS-CoV-2 virus (such as the spike protein) that stimulate an immune response without using live virus. The immune system recognizes these proteins as foreign and develops immunity.

23
Q

How do inactivated or killed virus vaccines work?

A

Inactivated or killed virus vaccines contain a virus that has been killed or inactivated so it cannot cause disease. These vaccines stimulate an immune response by introducing the complete, but non-infectious, virus to the immune system.

24
Q

What is the primary goal of COVID-19 vaccination?

A

The primary goal of COVID-19 vaccination is to reduce the risk of severe illness, hospitalization, and death from COVID-19, as well as to help control the spread of the virus and achieve herd immunity.

25
Q

What are some common side effects of COVID-19 vaccines?

A

Common side effects include pain at the injection site, fatigue, headache, muscle aches, fever, and chills. These side effects are generally mild and temporary, resolving within a few days.

26
Q

How can DNA sequencing help trace the origin of an outbreak?

A

DNA sequencing can identify genetic variations in viruses, allowing researchers to map the spread and evolution of the virus, track its origin, and understand how it has spread over time.

27
Q

What are the different classes of viruses discussed in the workshop?

A

The workshop likely covered various classes, including DNA viruses, RNA viruses, and possibly subcategories such as retroviruses, single-stranded RNA viruses, and double-stranded RNA viruses.

28
Q

How did sequencing contribute to understanding the early spread of SARS-CoV-2 in New York City?

A

Sequencing allowed researchers to analyze the genetic code of the virus from samples in New York City, revealing how the virus was introduced and spread through different communities, and identifying the origins of various strains.

29
Q

What role do viral mutations play in tracking outbreaks?

A

Viral mutations can create distinct genetic signatures that help identify and trace different strains of a virus, track their evolution, and understand their transmission patterns and impact on disease severity.

30
Q

What are some common methods of DNA sequencing used in virus research?

A

Common methods include Sanger sequencing, next-generation sequencing (NGS), and whole-genome sequencing.

31
Q

Why is it important to understand the classes of viruses in the context of emerging infections?

A

Understanding virus classifications helps in selecting appropriate diagnostic tools, developing vaccines, and implementing targeted treatment strategies, which are crucial for managing and controlling emerging infections.

32
Q

What can be inferred about the spread of SARS-CoV-2 from its genetic sequencing data?

A

Genetic sequencing data can provide information on the pathways of transmission, identify possible sources of the outbreak, and help predict future spread based on the observed mutations and patterns.