Genome Flashcards

1
Q

Summarize the significance of the human genome sequencing.

A

The sequencing of the human genome is a major achievement that provides insights into human health and disease, enabling better understanding and treatment of various conditions.

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2
Q

Describe the initial steps taken before sequencing the human genome.

A

Before sequencing the human genome, genomes of simpler organisms were sequenced to develop the necessary technology and expertise, allowing for cross-comparison of protein coding sequences, gene regulatory sequences, and noncoding RNA sequences.

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3
Q

Define dideoxynucleotide in the context of Sanger sequencing.

A

A dideoxynucleotide is a modified nucleotide that lacks a hydroxyl group at the 3’ position, which allows it to act as a chain terminator during DNA synthesis in Sanger sequencing.

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4
Q

How does chain termination work in Sanger sequencing?

A

In Sanger sequencing, chain termination occurs when a dideoxynucleotide is incorporated into a growing DNA strand, preventing further elongation of the chain, thus allowing for the determination of the DNA sequence.

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5
Q

Explain the contribution of Fred Sanger to genome sequencing.

A

Fred Sanger invented the Sanger sequencing method, for which he received his second Nobel Prize, significantly advancing the field of genome sequencing.

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6
Q

Describe the Sanger method of sequencing.

A

The Sanger method of sequencing is a technique used to determine the nucleotide sequence of DNA, utilizing dideoxynucleotides as chain terminators.

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7
Q

How did genome analysis change our understanding of protein-coding genes?

A

Genome analysis revealed that there are surprisingly few protein-coding genes in the human genome.

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8
Q

Define the potential medical implications of the $1,000 human genome.

A

The $1,000 human genome may allow for genomics to predict diseases before symptoms appear, leading to early therapy.

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9
Q

What is the significance of developing new sequencing methods in genomics?

A

New sequencing methods aim to reduce costs, making genome analysis more accessible as a tool for medical diagnosis.

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10
Q

Explain the relationship between the Sanger method and antiviral development.

A

The Sanger method’s use of dideoxynucleotides as chain terminators is based on chemical principles that also underlie the development of many antiviral drugs.

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11
Q

How might genomics influence early disease therapy?

A

Genomics could enable the prediction of diseases prior to the onset of symptoms, facilitating early therapeutic interventions.

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12
Q

Describe the significance of human genome sequencing.

A

Human genome sequencing revealed a lower-than-expected number of genes, with only about 20,000 genes identified instead of the predicted 100,000.

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13
Q

How do we produce a higher number of proteins than genes in the human genome?

A

The discrepancy between the number of genes and proteins is due to a process called alternative splicing, which allows for multiple proteins to be produced from a single gene.

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14
Q

Define the majority composition of the human genome.

A

The majority of the human genome is non-protein coding, meaning it does not directly code for proteins.

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15
Q

What is the role of non-protein coding regions in the genome?

A

Non-protein coding regions are important as they code for RNA and other essential functions, indicating that they are not merely ‘junk’ DNA.

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16
Q

Describe the 21st amino acid and its significance.

A

Selenocysteine is known as the 21st amino acid and is common in thyroid cells; selenium supplementation can help treat Graves Disease.

17
Q

What is Carboxylglutamate and how is it formed?

A

Carboxylglutamate is glutamate with an extra carboxyl group, formed through a vitamin K dependent reaction.

18
Q

Explain the importance of Carboxylglutamate in the body.

A

Carboxylglutamate is necessary for coagulation, which is the process of blood clotting.

19
Q

Why are vitamin K injections given to newborns?

A

Vitamin K injections are given to babies at birth because they do not have the proteins necessary to produce their own coagulation factors.