Using Polymerase Chain Reaction to Detect Bitter-Tasting Flashcards
receptors
receives chemical signals from outside a cell
example: molecule binds with it and signals its presence to the brain as one of the tastes.
gene expression
the process by which the instructions in our DNA are converted into a functional product, such as a protein.
phenylthiocarbamide (PTC)
bitter tasting compound detected by some, but not all, humans
gene
determined by genetics
humans have 2 copies
Example: TASR2R38
TASR2R38 gene
- Determines whether an individual detects a powerful bitter taste, slightly bitter, or no taste at all.
- Two of the most common variations differ at only one nucleotide- single nucleotide polymorphism (SNP.
genotype
genetic identity
Chelex
membrane, DNA
Chelex bead
TAQ poly
nucleotides
pH buffer
salts
Cheek cell DNA extraction
- Saline solution in mouth, rinse cheek and spit.
Saline is an isotonic solution for the cheek cells. - Centrifuge- pellet is the concentrated cheek cell and supernantant is the trash/buffers, etc.
- Add suspended cheeck celss to Chelex and boil. The boiling lyses the cell.
- Centrifuge again. DNA will be in supernatant and the pellet is protein.
- Pipette DNA supernantant into tube with Chelex bead- bead contains TAQ poly and nucleotides & pH buffer
Cheek cell DNA extraction
- Saline solution in mouth, rinse cheek and spit.
Saline is an isotonic solution for the cheek cells. - Centrifuge- pellet is the concentrated cheek cell and supernantant is the trash/buffers, etc.
- Add suspended cheek cells to Chelex and boil. The boiling lyses the cell.
- Centrifuge again. DNA will be in supernatant and the pellet is protein.
- Pipette DNA supernantant into tube clean tube
- Add PTC primer/dye to PCR bead (taq poly, nucleotides, ph buffers) and dissolve.
- Pipette cheek cell DNA into the primer/dye.
- Thermal cycle
-denaturing (94 C) 30 sec
-annealing (64C) 45 sec
-extending (72C) 45 sec
Cheek cell DNA extraction
- Saline solution in mouth, rinse cheek and spit.
Saline is an isotonic solution for the cheek cells. - Centrifuge- pellet is the concentrated cheek cell and supernantant is the trash/buffers, etc.
- Add suspended cheek cells to Chelex and boil. The boiling lyses the cell.
- Centrifuge again. DNA will be in supernatant and the pellet is protein.
- Pipette DNA supernantant into tube clean tube
- Add PTC primer/dye to PCR bead (taq poly, nucleotides, ph buffers) and dissolve.
- Pipette cheek cell DNA into the primer/dye.
- Thermal cycle
-denaturing (94 C) 30 sec
-annealing (64C) 45 sec
-extending (72C) 45 sec
restriction enzyme
can cleave DNA at or near a specific sequence of bases.
Hae III
SNP at bitter PTC compound
electrophoresis gel
method for separation and analysis of macromolecules
Hae III
SNP at GGCC only