Unit 4 - Cell Communication and Cell Cycle Flashcards
types of cell signals
lipid based and protein based
lipid based chemical signals
- nonpolar (not soluble in water)
- hydrophobic
since lipid based chemical signals are hydrophobic, what does this mean about cell membrane intercation
means it can go through the cell membrane
examples of lipid based chemical signals
steroids - estrogen, testosterone
what is the importance of lipid based chemical signals
they are important because they can pass right into the nucleus and modify DNA or gene expression
protein based chemical signals
- polar
- soluble in H2O
- hydrophillic
examples of protein based chemical signals
- epinephrine
- human growth hormone
- insulin
mechanisms of transmitting the signals
- direct cell to cell contact
- short distances
- long distances
juxtacrine
- signal transmitting mechanism
- direct cell to cell contact
ex: plasmodesmata, gap junctions, WBC’s
plasmodesmata
- juxtacrine
- plant cells
paracrine
- over short distances with chemical signals
- local regulators
ex: WBC’s, skin cells, neurons, quorom sensing
endocrine
- over long distances with chemical signals traveling within the blood
- endocrine system
- hormones
autocrine
- self signaling
ex: cancer
antigens
a chemical nametag for identification
explain juxtacrine
- macrophage attacks pathogen
- macrophage engulfs pathogen
- macrophage presents atnigen on cell membrane
- helper T-cell attaches and takes antigen
what happens to a cell infected with a virus
it presents the antigen
what happens after the infected cell presents antigen
- cytoxic T-cell connects to antigen
- local regulator makes cytoxic T-cell destroy cell
what happens after the local regulator makes cytoxic T-cell destroys cell
helper T-cell releases cytokines (local regulators)
local regulators
- chemicals released in short distances
- “signals”
- not in the bloodstream
how do bacteria communicate?
a bacteria will send out a signal
if bacteria gets a weak response, what happens?
nothing happens
if bacteria gets a strong response, what happens
gene transcriptions activated
endocrine system: glands
release hormones in the bloodstream
- target cells will have the receptors for the hormone
ligand
- the chemical messenger
- the smaller molecule that binds to a typically larger molecule
ex: insuline, hormones, local regulators
types of ligands
lipid based and protein based
signal reception
- a cell receiving a message (ligand)
- ligand binds to receptor
protein based ligands have which type of receptor protein
they have a transmembrane receptor protein
lipid based ligands have which type of receptor protein
they have a intracellular receptor protein
signal transduction relies on what
it relies on signal reception which link to cellular response
transmembrane receptor proteins are made by which type of ribosomes
bound ribosomes (make proteins for cell membrane)
extracellular domain of transmembrane receptor proteins
- outside
- where the ligand binds
- polar
transmembrane region/domain
- nonpolar
intracellular region/domain
- polar
extracellular domain
- where the ligand attaches
- polar
types of transmembrane proteins
- G-Protein Receptors
- receptor tyrosine kinases
- ligand gated ion channels
g-protein linked receptor: components
- alpha, beta, gamma subunit and GDP molecule
g-protein linked receptor: a shape change does what
a shape change in the receptor protein activates G-Protein
GDP -> GTP
- alpha subunit breaks off from beta/gamma
what keeps the g-proteins in place
- tails keep G-protein in place
- if it was polar, this wont happen
steps of G-Protein reception
- ligand attaches to the G-Protein linked receptor
- attachment led to a conformational change in shape
- change in shape activates g-protein
- alpha subunit breaks free, GDP is replaced with GTP
what is the function of epinephrine
- fight or flight response
- increases heart rate
- breathing rate increases
- cell respiration increases -> need more C6H12O6
- breaks down glycogen to make glucose
what happens after the alpha subunit breaks free, and GDP is replaced with GTP (g-protein reception)
- when ligand is removed the receptor returns to original shape
- active g-protein diffuses across membrane
- activates adenylyl cyclase (changes shape)
- adenylyl cyclase converts ATP to cyclic AMP
- alpha subunit comes off adenylyl cyclase and returns to inactive form
- alpha subunit hydrolyses GTP to GDP (inactive)
what does adenylyl cyclase do?
it converts ATP to cyclic AMP
cyclic AMP
- second messenger
- relaying the original message into the cell
- amplify the message
does the adenylyl cyclase move?
this doesn’t move
now that the original signal/message (epinephrine) has been relayed/converted into an intracellular signal (cAMP as the second messenger), what next?
kinases
- proteins
- function is to phosphorylate other proteins (kinases, enzymes)
phosphotase
removes phosphate from proteins
g-protein reception: what happens after alpha subunit hydrolyses GTP to GDP (inactive)
- cyclic AMP activates protein kinase A
- protein kinase A removes a phosphate from ATP
- uses that P to phosphorylate the next protein kinase
phosphorylation cascade
- a chain reaction
- one kinase phosphorylates the next and so on
- this cascade amplifies the signal within the cell
g-protein reception: what happens following phosphorylation cascade
- protein kinase A is deactivated, cyclic AMP is turned into just AMP
- protein kinase 1 picks up a phosphate and phosphorylates protein kinase 2
- protein kinase 2 activates an enzyme that will hydrolyze glycogen
do protein kinases stay active or inactive
inactive
what does adding a phosphate do
it changes the shape therefore also the function
dimer
receptor tyrosine kinase: insulin
- insulin attaches to the ligand bonding site
- forms a dimer
- causes auto phosphorylating which activates the dimer
- the dimer will phosphorylate relay proteins to pass the message on
- this will relay the message and bring about a cell response
what does insulin do
it reduces blood sugar
**HOW**
ligand gated ion channel
- neurotransmitter or local regulator binds
- gate opens
- ions can rush inside
- when regulator is removed gate closes
why do multicellular cells rely on proper communication
they need their cells to work together to carry out functions
what is a receptor
a molecule (ex: protein) where a signal molecule can bind
gap junctions
- animal cells
- connections between two close together cells that can allow ions or other small molecules to pass so they don’t have to pass across a cell membrane
synaptic signaling
- involves neurotransmitters and synapse
- example of paracrine signaling
autocrine signaling works how
- a cell secretes a certain molecule then binds to its own receptors and causes a response
simply explain ligand gated ion channels
- a ligand binds to a receptor (channel protein)
- in response, the channel protein opens
- ions are now able to go through, increasing the concentration of ions in the cell
- after reaching a certain concentration, the ligand leaves binding site and channel closes
are all ion channels LIGAND gated ion channels
no, they can be gated by other things
ex: voltage gated ion channel (dependent on electrical membrane potential)
key idea: body processes essential to life rely on cell signaling
cancer cells: disability
- produces too much of its own growth factor causing excessive cell division
examples of pathogens
bacteria or viruses
virus HIV: pathogens
- targets helper T-cells’ CD4 receptor
- virus can attach and infect the cell
helper T-cells
- important immune cells
- contain CD4 receptors on their surface (to communicate with other immune cells)
phosphorylation
- the modification of proteins via addition of a chemical phosphate group
to function properly, cells must regulate processes to occur at the right time and place. they do this primarily by…
regulating the activity of proteins
- one way in which this is done, phosphorylation
what allows a phosphate group to be added to a protein by transferring the phosphate from ATP to the target
the enzyme kinase
what removes the phosphate group
the phosphatase enzyme
whether or not a protein is phosphorylated depends on what
if there are more kinases or phosphatases near it
how does phosphorylation really affect proteins
- adding a negatively charged phosphate group can affect how the amino acids bind together, changing the 3D structure
cell communication in animals depends largely on what
hormones
quorum sensing
the use of chemical messengers between bacteria to develop a community response
- bacteria infect a host with toxin and produce a ligand; once concentration of the ligand reaches a certain point, it becomes an indicator that bacteria population is sufficient and allows bacteria to act accordingly
two major classifications of hormones are
- peptide based hormones
- steroid based hormones
steroid hormones: characteristics
- nonpolar
- can freely cross cell membrane
- bind to intracellular receptor, enter nucleus, and initiate transcription
- ex: sex hormones
peptide hormones: characteristics
- large and polar
- cannot cross cell membrane, so they bind to an extracellular receptor
- initiate transcription
- trigger signal transduction
in steroid hormones, what enters the nucleus
the hormone receptor complex enters the nucleus to cause DNA transcription resulting in cellular response
does the protein ligand ever enter the cell?
NO.
- when the protein ligand binds its extracellular receptor, changes occur on the intracellular domain that cause the signal to get transmitted without the protein ever entering the cell or the nucleus
what are the 3 basic steps of cell signaling (peptide hormones)
- reception
- transduction
- response
cholera
- disruption of signal transduction
- increased cAMP
- increased activity of ion pumps
- increased movement of ions from cells into intestinal tracts
- increased flow of water
- dehydration
what is signal transduction
Transduction is the conversion of a signal into a cellular response.
- the multiple steps that translate ligand into a response
what are some general examples of responses
- gene is turned on
- protein is manufactured
- enzyme is activated
- cell divides or dies
signal transduction pathway is when
a small collection of signal molecules produce a large response across the cell (amplify)