Unit 2 Flashcards

1
Q

What determines the health and inherited features of a nascent cell

A

The accuracy of the DNA copy

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2
Q

What are the bases in DNA

A

Adenine
Thymine
Cytosine
Guanine

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3
Q

What is complimentary base pairing

A

A binds with T
C binds with G

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4
Q

Does every cell have the same DNA and uses is it the same way

A

It is the same but used is different ways depending on the type of cell

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5
Q

What is transcription

A

RNA is built by RNA polymerases

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6
Q

What is a difference between RNA and DNA

A

RNA has:
1 stand instead of 2
Uracil instead of thymine
Has a ribose instead of deoxyribose

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7
Q

What does mRNA do

A

Carries the coding sequence

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8
Q

What does rRNA do

A

Form the core of a cells ribosomes

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9
Q

What does tRNA do

A

Transport the amino acids

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10
Q

What is a difference in RNA between prokaryotes and eukaryotes

A

In eukaryotic cells, each class of RNA has its own polymerase, whereas in prokaryotic cells, a single RNA polymerase synthesizes the different classes of RNA.

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11
Q

What is transcriptome

A

The spectrum of which mRNA are present in the cell

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12
Q

What are ribosomes

A

The site where protein synthesis takes place

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13
Q

What are ribosomes made of

A

complexes of rRNA molecules and proteins

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14
Q

Fill in the blank:
Sometimes , ribosomes are visible as clusters, called …

A

polyribosomes

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15
Q

How many proteins are there in ribosomes

A

nearly 60 in prokaryotic cells and over 80 in eukaryotic cells

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16
Q

What are other names for rRNA

A

ribozyme or catalytic RNA

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17
Q

What is translation

A

The codon corespondents with a amino acid, than a chain is made

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18
Q

What is special about translation in prokaryotes

A

Transcripten and translation are so closely linked that translation usually begins before transcription is complete

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19
Q

What is chromatin

A

DNA protein that helps packaging it

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20
Q

True of false
During interphase the DNA is tightly packed to a point where we can see it with a microscope

A

False, during this stage it is less tightly packed

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21
Q

How is DNA packed in a prokaryote

A

In a singe circular chromosome that is located in the cytoplasm

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22
Q

What are nucleosomen

A

Repeated units of chromatin

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23
Q

What are nucleosomes made up of

A

DNA that has complexed with 8 small histones

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24
Q

Which types of histones are there

A

H2A, H2B, H3, and H4

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25
How are the histones and DNA connected
DNA is negative and histones positive
26
How many times wraps the DNA around a histone
Less than twice
27
What are the N-terminal tails
The part of the histone that sticks out
28
How wide is the first level of packing
30 nm
29
How can packing control gene expression
Controls access to DNA
30
What is euchromatin and hetrochromatin
Euchromatin: Regions of chromatin where active transcription is taking place Hetro: Regions where transcription is inactive or is being actively inhibited or repressed.
31
How is the dynamic chromatin regulated
By enzymes
32
What is the function of remodeling enzymes
to slide nucleosomes along the DNA strand so that other enzymes can access the strand.
33
What is histone code
the complex pattern of histone modification They increase or decrease gene expression
34
How was discovered that chromosomes have functional and decidedly nonrandom arrangements
By using fluorescent
35
What is chromosome territories
uncondensed chromosomes occupy characteristic regions of the nucleus
36
What do you know about the territories
It can bring particular genes closer They differ from cell to cell
37
introns are getting cut out or have the real gene code
cut out
38
what does a cyclin do in DNA translation and transcription
as a regulator of a specific phase
39
what is the first step of trandcription
RNA polymerase binds to a promotor sequence on the 5' side (or 3' side)
40
what are enhancer sequences
binding sites for regulatory proteins that affect RNA polymerase
41
a open chromatin stucture is associated to active/inactive and a compact one to active/inactive
active inactive
42
transcription of a prokaryote is controlled by..
nutrient availability
43
on what does a amino acid bind (DNA, prokatyote)
activator
44
what happens when an amino acid binds to a repressor
RNA polymerase stops
45
what causes loops in DNA, during translation
activator proteins bind to RNA polymerase
46
What is the difference between deoxyribose and ribose?
Ribose has an extra hydrogen oxide group
47
What is the difference between uracil and tyrosine?
Tyrosine has an extra methyl group
48
Does mRNA go from the 5 to 3 side or from the 3 to 5 side
5 to 3
49
Does DNA go from the 5 to 3 sides or from the 3 to 5 sides
3 to 5
50
How does the RNA polymerase know where to start?
Promotor
51
What is the template stand
The DNA strand on which the RNA wil bind
52
What is the coding strand
The code that wil be the same as the RNA
53
When will RNA polymerase stop?
At the Terminator
54
What are amino acids made of?
An alpha carbon atom link to an amino group, a carboxyl group, a hydrogen atom, and a extra components called the side chain
55
How are amino acids linked together?
By peptide bonds 
56
How are peptide bonds formed 
By a bio chemical reaction that extracts a water molecule as it joins a amino group of one amino acid to the carboxyl group of the neighboring amino acid 
57
How is a linear sequence of amino acids called
Primary structure 
58
How many amino acids are there?
20
59
Are the charges of each amino acid, the same
No, there are ones who are positively charged and ones that are negatively charged also ones that are uncharged 
60
What kind of bond is formed by charged amino acids?
Ionic bonds 
61
Which type of amino acids are capable of forming a hydrogen bonds
Polar amino acids
62
By what kind of interactions do hydrophobic side change interact with each other? 
Weak van der Waals interactions
63
Are the majority of bonds formed by van der Waals interactions noncovalent or covalent
Non covalent
64
Which are the only amino acids capable of forming covalent bonds
Cysteines
65
What causes folds in a protein?
Hydrogen bonding between amino groups and carboxyl groups 
66
What is a secondary structure of a protein made up of
Alpha helices Beta sheets
67
What happens when a protein is dissolved in cytoplasm?
Hydrophilic groups go to the surface and hydrophobic groups are getting tucked inside
68
How are proteins structures studied
X-ray crystallography
69
What do chaperone proteins do
Make sure that the protein doesn’t interact with other structures
70
What does GroEL do
Form a hollow chamber around proteins
71
What does GroES do
Forms a lid over the chamber made by GroEL
72
Folded proteins are weak/strong
Weak
73
What is a protein family
A group of proteins that are similar
74
How are proteins altered after translation
By transferase enzymes who add small modifier groups (phosphates or carboxyl groups) to proteins
75
Are post-translational modifications reversible
Yes
76
How can proteins move within the plasma membrane
By membrane diffusion
77
What is fluid-mosaic model
The concept that membrane-bound proteins that can travel within the membrane
78
Why kind of mutation had the most effect
Mutation in the DNA
79
Where do mutations come from
Inherent Spontaneous (DNA replication errors, environmental factors, random)
80
How many chromosomes do we have
46, 23 pairs
81
What is an allele
A specific site on a chromosome that makes you, you
82
What is homozygous
When the allele for something is the same on both chromosomes
83
What is genotype
The two alleles that code for something
84
What is the phenotype
The actual outcome of the genotype (eye color)
85
What is PCR
Making a lot of copies of a DNA fragment
86
What is denaturation
When dubbel stranded dna is split into one strand by the heat(98°)
87
What is primar annealing
The primer attached to the dna (55°)
88
What is primer extension
When it’s heating up (72°) tag polymerase extends the primer
89
What do you have after one cycle of PCR
2 dubbele strandend DNA’s