Transcription Flashcards

1
Q

Housekeeping gene expression

A

Gene is expressed in all tissues

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2
Q

Transcription

A

Gene expression

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3
Q

Promoter gene sequences

A

Control gene expression and act as the recognition site for RNA Pol

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4
Q

Coding gene sequences

A

Transcribed into mRNA

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5
Q

Genes

A

Made up of nucleotides and regulatory sequences

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6
Q

RNA polymerase

A

Copies DNA sequence from template strand to make RNA

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7
Q

Prokaryotic RNA polymerase

A

Has only 1 type and consists of 5 subunits

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8
Q

Sigma subunit

A

Recognizes promoter and dissociates after initiation

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9
Q

initiation complex

A

Made up of 10 nucleotides, its rate of formation affects the rate of transcription and it forms upon the recognition of the sigma factor

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10
Q

Beta prime subunit

A

Catalyzes the formation of a phosphodiester bond

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11
Q

Beta subunit

A

Binds DNA to the forming RNA

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12
Q

Elongation

A

Synthesizes the RNA transcript

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13
Q

Termination

A

Done by a palindromic sequence or a rho factor

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14
Q

Palindromic sequences

A

Gc rich region that folds to form a hairpin loop

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15
Q

Rho factor

A

Protein that binds to the RNA and moves along it to catch up to the polymerase to destabilize the hybrid

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16
Q

Eukaryotic RNA polymerase ll

A

Found in the nucleoplasm and transcribes mRNA

17
Q

Eukaryotic RNA polymerase lll

A

Found in the nucleoplasm and transcribes tRNA

18
Q

Rate of eukaryotic transcription

A

Regulated by the binding of transcription factors to specific promoter sequences

19
Q

Gc box

A

Found in house keeping genes

20
Q

Tata box

A

Found in tissue specific genes and it is used for specifying the start site of transcription

21
Q

Ccaat box

A

Important for transcriptional initiation

22
Q

Enhancer elements

A

DNA sequences that act as transcription activators required for full activity of the promoter

23
Q

Types of transcription factors

A

Basic, promoter-specific, coactivators

24
Q

RNA processing steps

A

mRNA capping, addition of poly A tail, RNA splicing

25
Q

mRNA capping

A

Addition of a 7-methylguanosine to the 5’ nucleotide via a 5’-5’ triphosphate bridge by guanylyltransferase

26
Q

Addition of poly A tail

A

Polyadenylate pol complex cleaves RNA and poly A pol adds an A tail at the 3’ end, this results in homogenous fragments of RNA

27
Q

RNA splicing

A

The removal of introns

28
Q

Spliceosome

A

Set of proteins and RNA where splicing happens

29
Q

Eukaryotic RNA pol l

A

Found in the nucleolus and transcribes rRNA