Topic 6: Flashcards
PHLOGENETIC DIVERSITY?
Result of 4 billion years of evolution
Metabolic diversity
if there is a niche to exploit, micro-organisms have adapted to exploit it
Catabolism
Releases energy
breaking things down
anabolism
consumes energy
makes things, nutrients are needed
Macronutrients
Required by all cells to build macromolecules
C N P S O
Micronutrients
needed by some cells
Fe Cu Na Mg Mn
Pathogens really know Fe
Fundementals of nutrition NAMES
Energy source:
Photo/chemo
Electron source:
organo/litho
Carbon Source:
hetero/auto
What are humans? E.coli, Pathogens, anything in bio240L
Chemoorganoheterotrophs
What are cyanobacteria named?
Photolithoautotrophs
get e- from water
eat co2 but electrons arent from there
What is only found in prokaryotes?
Chemolithotrophs
Phototrophs are oxygenic or anoxygenic?
Yes!
Carbon is a major requirement for all organisms. Why?
-energy storage and manipulation
-structural purposes
Autotrophs fix co2 into C
Heterotrophs
use organic molecules made by autotrophs
What is growth rate dependent on?
Nutrient concentration. The higher the concentration, the faster the growth rate
Nitrogen is aquirred how?
Ammonia into glutamine or glutamate
-critical for amino acids and nucleic acid construction
Nitrogen is needed in a useable form and this is the useable form
Why do we need to limit growth?
Uncontrolled growth means that technically , under ideal circumstances, something like n ecoli can “grow to the size of the earth”
Obligate Aerobe
require oxygen
microaerophiles
grow best in low oxygen levels
obligate anaerobes
cannot grow when o2 is present
aerotolerant aerobes
are not harmed by o2 but dont use it
faculatative anaerobes
can grow without oxygen but grow better when it is present
Toxic oxygen species
impact of o2 respiration on a cell depends on a cells available defenses
O2-, OH-, H2O2, are all oxidizers that oxidate anything that it can find
cell needs to have ways to prevent this so that it doesnt have its lipids, proteins or dna oxidize. Those that are able to do this can live in oxygen environments
pg 23 on notes
Catalase Test
Determine whether species can handle o2 or not
Catalase takes peroxide and converts it to oxygen
-means aerobe cause can handle respiring oxygen
h2o2 + h2o2 -> 2H20 + O2
pH names of microbes
Acidophile: 5.6 and lower
Neutrophile: 6-8
Alkalophiles: 8-14
What can decrease water activity? Aw
interaction with solutes decrease Aw
pure h20=1.0
seawater:0.98