Topic 2 Flashcards
What happens when an organism inc in size
- Volume increases
- Greater size of organ, lowe SA:V
What are Exchange Surfaces adapted for
-efficiency of gas and solute exchange across them
Thin Membrane adaptation for Gas Ex
-reduces diffusion distance
Large Surface Area adaptation for Gas Ex
-Allows a greater amount of substance to diffuse at the same time
Blood Vessels adaptation for Gas Ex
- In animals, substances are exchanged through blood
- exchange surfaces densely packed to replenish blood supply
Exchange surfaces adaptation for Gas Ex.
-maximise the efficiency of gas and solute
Ficks Law
-Rate of Diffusion = (SA x Conc diff)/thickness of surface
Diffusion rate in Ficks Law
-DR is higher when SA and Diff C are larger, thickness of Surface is smaller
What aids Active Transport?
-Carrier Proteins - Facilitates movement
Example of Active Transport?
- Sugar Absorption in the gut
- allows sugar molecules (respiration) to be absorbed into blood via gut
- even when sugar conc. in blood higher
Two Main factors of Active Transport?
- SA of cell membranes
- Number of carrier proteins in cell membranes
What is Active Transport?
- Molecules move from a less conc. solution too higher conc. solution against a concentration gradient
- Energy via respiration
What type of structure is an enzyme determined from
-tertiary
What is the Enzyme Active Site?
- Only catalyses one specific reaction
- Complementary to the specific substrate
Environmental factors that determine the specificity of the enzyme?
- 3D tertiary structure
- Polyp. chain determines Active site
How do enzymes catalyse reactions?
-Lowering the activation energy
Activation Energy?
-Amount of energy needed for the reaction to take place
Lock and Key Hypothesis
-Proposes that enzyme and substrate fit together perfectly
Induced fit Theory?
-More dynamic interaction
Bronchioles
-Millions of small branches throughout lungs
Alveoli
-Sacs that fill with air when breath in
Bronchi
-Air flows along the lungs
Trachea
-Entrance to gas exchange system
3 things Ventilation is controlled by
- Bones that form the ribcage
- Diaphragm
- Intercostal Muscles
Capillaries role in gas exchange
- Surrounds Alveolis
- Provide a large surface area
Alveolar Epithelium
- Single Layer
- Provide very short diffusion distance
- Maximises gas exchange rate
Concentration Gradient at the Alveoli
- Capillaries provide Co2, ,Oxygen at Alveoli
- Steep concentration gradient
What does the Permeability of the Cell Membrane depend on
- Solvent Concentration
- pH
- Temperature
What are Phospholipids made out of
- Glycerol
- Two Fatty Acids
- Phosphate
Where is cholesterol in the membrane
- Core of the Membrane
- Maintains shape of animal cells
Solvent Concentration effect on Phospholipid Bilayer and how can it be controlled?
- More easily dissolved = More Permeable membrane
- Can be Controlled if using same Solvent for each trial
pH effect on Phospholipid Bilayer and how can it be controlled?
- pH affects protein structure
- Buffer solutions can control this
Temperature effect on Phospholipid Bilayer and how can it be controlled?
- Higher temp increases fluidity of bilayer
- using a water bath
First Step of Cell Membrane Beetroot Practical
-Collect Beetroot Sample
Second Step of Cell Membrane Beetroot Practical
-Place samples in Ethanol for 10 minutes
Third Step of Cell Membrane Beetroot Practical
-Remove discs from solutions
Fourth Step of Cell Membrane Beetroot Practical
-Calibrate the Colorimeter
Fifth Step of Cell Membrane Beetroot Practical
-Measure the absorbance of each solution
5 Steps of Cell Membrane Beetroot Practical
1) Collect Beetroot Sample
2) Place samples in Ethanol for 10 minutes
3) Remove discs from solutions
4) Calibrate the Colorimeter
5) Measure the absorbance of each solution
Plasma Membrane
-Structure that defines the border of cells
Glycoproteins and Glycolipids function
-signalling receptors
Osmosis
-Diffusion of water across a partially permeable membrane from a low concentration solution to a high concentration solution
Partial Permeable Membrane
-Allows water through, not larger molecules
Primary Structure of Proteins
-Dependent on structure of Amino Acids
Amino Acid Sequence
-Specific sequence to determine Primary Structure
Importance of a change in amino acid sequence
- Could lead to change in amino acid being produced
- Could change structure and function
Secondary Structure of Proteins
-Polypeptide chain folding
Hydrogen bonds in Polypeptide chain determining Secondary Structure?
- Amino Acids can form hydrogen bonds between eachother
- These cause chain to fold which determines secondary structure
Common Features of Secondary Structure
-Alpha Helix and Beta Pleated Sheets
Stability in Secondary Structure
- High Number of bonds leads to stability
- Can be affected via environmental factors - pH, Temp
Tertiary Structure
- Secondary structure folds even more
- Creates Three Dimensional shape
R groups effect on Tertiary Structure
- Side chains on amino acids
- Interactions between R groups lead to 3D structure
Quaternary Structure
-3D polypeptides come together to form this structure
Examples of Quaternary structure
- Haemoglobin
- Insulin
Haemoglobin Quaternary structure features
-four polypeptides surrounding central Haem group
Insulin Quaternary structure features
-Combination of Hydrogen bonds and Disulfide bridges
What is Exocytosis and Endocytosis responsible for?
-Ways in which substances can be actively transported across membranes using ATP
Endocytosis?
- Cell engulfs a substance from its surroundings
- Fluid cell membrane folds around substance
Exocytosis?
- Membrane-bound vesicles fuse with plasma membranes before releasing into surroundings
- used when cells produce a substance which needs to be exported
Transcription?
mRNA produced in the nucleus
Transcription steps?
1) Binding of RNA Polymerase
2) Separation of DNA strands
3) Binding to template strands
4) Joining the Nucleotides
5) STOP codon
6) Removal of mRNA
7) mRNA leaves Nucleus
Transcription - (1)Binding of RNA Polymerase
- This enzyme allows transcription to take place
- Binds to Locus of gene
Transcription - (2)Separation of DNA strands
- When RNA Poly. binds to DNA
- Triggers Hydrogen bonds so DNA unwinds (exposes bases)
Transcription - (3)Binding to Template strands
- RNA Poly. binds free floating RNA nucleotides to template strands
- This forms mRNA - complementary to the gene
Transcription - (4)Joining the Nucleotides
-Phosphodiester bonds formed in between nucleotides
Transcription - (5)STOP Codon
-RNA Poly. reaches stop codon ‘UAG’
Transcription -(6)Removal of mRNA
-mRNA strand separated from template by RNA Poly.
Transcription -(7)mRNA leaves nucleus
-mRNA leaves nucleus and enters cytoplasm
Translation steps?
1) Attachment to Ribosome
2) Binding of tRNA
3) Bringing in Amino Acids
4) Binding of Second tRNA
5) Movement of the Ribosome
6) STOP Codon
7) Completion of Polypeptide
Translation -(1)Attachment to Ribosome
-mRNA binds to Ribosome (sight of Protein Synthesis)
Translation -(2)Binding of tRNA
- One Molecule of tRNA binds to first codon in ribosome
- tRNA has anticodon complementary to specific codon
Translation -(3)Bringing in Amino Acids
-Each tRNA molecule carries a specific amino acid to the ribosome
Translation -(4)Binding of Second tRNA
- tRNA binds to second codon in ribosome
- tRNA binds to mRNA, corresponding amino acid is brought to ribosome
- Peptide bond formed between amino acids
Translation -(5)Movement of the Ribosome
- When amino acid is formed
- Ribosome moves along mRNA strand so new codon enters ribosome
Translation -(6)STOP Codon
-Ribosome reaches UAG then stops
Translation -(7)Completion of Polypeptide
-Polypeptide chain formed
How does DNA Replication Occur
- each of two DNA strands used as template
- New strands copied
What is DNA made up of
-Two Polynucleotide strands that form a double helix
Why is DNA known to be Semi-conservative
- After Replication DNA is made up of one polynucleotide strand
- One original strand is conserved
3 steps of DNA Replication
1) DNA helicase binds to DNA and breaks hydrogen bonds between strands (strands separate)
2) Free-floating Nucleotides form hydrogen bonds with complementary bases
3) DNA polymerase forms Phosphodiester bonds between nucleotides
What is DNA Polymerase responsible for?
- Catalyses condensation reaction between nucleotides in DNA strand
- forms phosphodiester bonds between adjacent nucleotides
Watson and Crick’s discovery of DNA replication
- Specific base pairing involved in copying sequences of genetic information
- thought each strand = template which complementary strand copied
- Did not know how replication took place