Tertiary structure Flashcards

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1
Q

what are Fibrous proteins

A
  • Scleroproteins
  • 2° structures form long parallel fibres and sheets
  • Usually insoluble
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2
Q

what are the two types of fibrous proteins important for support and strength

A
  • Collagen

* Keratins

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3
Q

give example in where alpha and beta keratin are found

A
  • α-keratins
  • Mammalian hair and nails
  • B-keratins
  • Invertebrate silks, reptile claws, scales and shells
  • Avian feathers, beaks and claws
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4
Q

Collagen structure and properties

A
  • Superhelices of glycine-rich α-helices
  • Main protein of connective tissue
  • Most abundant protein (25% of total protein)
  • Strong and elastic
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5
Q

α-Keratins: Hair and nails structures and properties

A
  • Composed of coiled-coils of two α-helices that assemble together into larger fibres
  • Strong and inextensible
  • Insoluble and chemically inert
  • Disulphide bridges cross link coiled coils
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6
Q

beta-Keratins: Fibroin structures and properties

A
  • Fibroin is found in silk cloth and spider webs
  • Layers of anti-parallel β sheets rich in Ala and Gly residues
  • Small side chains interdigitate and allow close packing of the sheets
  • Great strength
  • Sheets joined by amorphous stretches which confer elasticity
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7
Q

what are Globular Proteins properties

A

• Mixture of irregularly folded secondary elements to form a compact 3-D spherical shape

  • Usually soluble with inner hydrophobic core
  • Transported easily in body fluids
  • Important functions in cell chemistry
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8
Q

examples of Globular Proteins?

A
  • Myoglobin
  • Haemoglobin
  • Immunoglobins
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9
Q

where is it found Myoglobin and what is its structure

A

oxygen
porphyrin and fe+2
histidine

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10
Q

what are Quaternary Structure

A
  • Assembly of subunits (separate polypeptide chains) of multimeric proteins
  • Enabled by van der Waals interactions
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11
Q

structure of Haemoglobin A

A

• Tetramer

  • 4 chains/subunits (α2, beta-2)
  • 4 haem molecules (porphyrin and Fe2+)
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12
Q

how do these diseases arise

A
  • Sickle Cell Anaemia
  • beta-chain mutation (Glu to Val)
  • Thalassaemia
  • Underproduction of globin chains (genetic)
  • beta-thalassaemia (beta-chains decrease )
  • α-thalassaemia (α-chains decrease )

• Porphyria

  • decreased Haem production (defects in synthetic pathway)
  • Photosensitivity, hirsutism and discolouration
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13
Q

what are Immunoglobulins

A

• Y-shaped proteins (antibodies) used by the immune system to identify and combat non-self

  • 4 chains linked by disulphide bridges
  • 2 large H (heavy) chains
  • 2 short L (light) chains
  • Chain tips have a variable structure
  • Chain tips form specific binding sites for non-self targets (antigens)
  • Antigen recognition by an antibody tags it for attack by other parts of the immune system
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14
Q

Some proteins tend to aggregate into non-functional structures during assembly

what is a Chaperone proteins

A

• Chaperone proteins assist the non-covalent folding/unfolding of a protein

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15
Q

Chaperone protein functions

A
  • Prevent aggregation into non-functional units
  • Repair misfolded/heat damaged units
  • Require ATP for energy to assist folding
  • Chaperonin is a type of chaperone
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16
Q

why is preventing aggregation important?

A
  • Aggregation can cause disease

* Prion and amyloid

17
Q

what occurs to proteins when pH changes

A

Low pH = high H+ concentration (acidic)

Adding H+ neutralises the COO- part of the ionic bond removing its charge

High pH = low H+ concentration (alkaline)

Removing H+ neutralises the NH3+ part of the ionic bond removing its charge

18
Q

how can Denaturation occur from extreme pH?

A
  • Extreme pH changes
  • Break ionic bonds
  • Degrades tertiary structure
  • Can produce insoluble secondary structures
19
Q

how can Denaturation occur from extreme heat?

A
  • Vibrates and breaks hydrogen and ionic bonds

* Pyrexia

20
Q

Give examples of Denaturants

A

• Alcohol, acetone (solvents)