specimen collection and processing Flashcards
The first step in the workflow of bacteriology
Specimen collection
specimen collection and transportation are ________ because the results generated by the laboratory are limited by the quality and condition of the specimen upon arrival in the laboratory
Critical consideration
These are the two (2) critical considerations in the specimen collection and processing
- Specimen collection
- Transportation
When should we schedule the collection of the specimen?
- Acute phase of an illness (early stage)
- Before antimicrobials, antifungals, or antiviral medications are administered
____ generally are poor specimens if tissue or needle aspirates can be obtained
Swabs
Specimen should be transported within ____ of collection
2 hours
must be less than 2 hours of collecting the specimen
These are done when the specimen is delayed within 2 hours of collection
- Refrigeration
- Preservatives
- Transport medium
to ensure organism viability
It should be leak-proof, and the specimens should be transported within sealable, leak-proof plastic bags with a separate section for paperwork; resealable bags or bags with a permanent seal are common for this purpose
Specimen containers
Specimen containers should be leak-proof, and the specimens should be transported within sealable ________ with a separate section for paperwork; resealable bags or bags with a permanent seal are common for this purpose
Leak-proof plastic bags
must be sealable
Bags for specimen transportation should be marked with this label
Biohazard label
indicating the presence of biological hazard
Enumerate the different transport media used in specimen collection and processing
- Amies transport media
- Amies transport media with charcoal
- Anerobic transport media
- Cary-Blair transport media
- Formalin (5%-10%), PVA , SAF, Total-Fix, Eco-Fix
- Stuart’s transport media
- Universal transport media
Transport media:
Used for the recovery of aerobic and anaerobic bacteria
Amies transport media
Transport media:
Used for the recovery of aerobic and anaerobic bacteria; charcoal neutralized bacterial toxins and other inhibitory substances, maintains pH
Amies transport media with charcoal
used in fastidious organism
Transport media:
Used for the numerous commercial systems available; recovery of anaerobes, and microaerobic bacteria
Anaerobic transport media
Transport media:
Used for the recovery of enteric pathogens
Cary-Blair transport media
Transport media:
Used for the recovery of gastrointestinal parasites; some may be acceptable for immunoassays
- 5%-10% Formalin
- PVA (polyvinyl alcohol)
- SAF (sodium acetate-acetic acid-formalin)
- Total-Fix
- Eco-Fix
Transport media:
Used for the recovery of bacteria
Stuart’s transport media
general transport media
Transport media:
Used for the recovery of chlamydia, mycoplasmas and ureaplasmas and viruses
Universal transport media
Enumerate the four (4) preservatives used for specific specimens
- Boric acid
- Polyvinyl alcohol and Buffered formalin
- Transport or holding media
- Anticoagulant
Specimen preservatives:
It maintain the appropriate colony counts of the urine
Boric acid
Specimen preservatives:
It is used for stool for ova and parasite (O&P) examination
Polyvinyl alcohol (PVA) and Buffered formalin
Specimen preservatives:
It maintain the integrity of trophozoites and cysts
Polyvinyl alcohol (PVA) and Buffered formalin
Specimen preservatives:
It maintain the viability of microorganisms present in a specimen without supporting the growth of the organisms
Transport or holding media
Specimen preservatives:
It maintains the organisms in a state of suspended animation so that no organism overgrows another or dies out
Transport or holding media
It is added to absorb fatty acids present in the specimen that could result in pH changes in the media and the killing of fastidious organisms
Charcoal
Specimen preservatives:
It is used for blood and body fluids to prevent clotting of specimens
Anticoagulant
Specimen preservatives:
Enumerate the two (2) examples of anticoagulant used in bacteriology for specimen preservation
- 0.025% Sodium polyanethol sulfonate (SPS)
- Heparin
Specimen preservatives:
A type of vacutainer used in bacteriology for blood culture collection systems
0.025% Sodium polyanethol sulfonate (SPS)
Manufacturer of the “yellow top” anticoagulant
Becton, Dickinson and company (BD)
Specimen preservatives:
An anticoagulant used for viral cultures, although it inhibit the growth of gram-positive bacteria and yeast
Heparin