Skills & Applications Ch 3 Flashcards

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1
Q

Findings & benefits of Human Genome Project

A
  • humans share most of their DNA sequences
  • number, location, size, & sequence of human genes was established
  • medicine –> discovery of new proteins
  • improved treatments
  • ancestry –> origins, evolution, migratory patterns
  • cooperation + collaboration
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2
Q

Causes & consequences of sickle cell anemia

A
  • single nucleotide (base substitution) mutation
  • GAG –> GTG
  • mutation of the 6th gene of haemoglobin
  • mRNA copies the mutation of DNA
  • glutamic acid is substituted by valine
  • distorted haemoglobin protein (HbS)
  • sickling + blocks capillaries
  • can give resistance to malaria
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3
Q

Genome size of:
- T2 phage = ?
- E coli - ?
- D melanogaster = ?
- Homo sapiens = ?
- Paris japonica = ?

A
  • T2 phage = 0.18
  • E coli - 5
  • D melanogaster = 140
  • Homo sapiens = 3,000
  • Paris japonica = 150, 000
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4
Q

Chromosome numbers
- Homo sapiens =
- chimpanzee =
- dog =
- rice =
- horse threadworm =

A
  • Homo sapiens = 46
  • chimpanzee = 48
  • dog = 78
  • rice = 24
  • horse threadworm = 4
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5
Q

Cairn’s Technique of Autoradiography

A
  • measured lengths of DNA molecules
  • grew E coli in medium containing radioactively labelled thymine, so DNA ONLY was labelled not RNA
  • he placed cells on membrane & digested their walls –> DNA spilled out over the membrane
  • coated membrane with photographic film & left it in the dark for 2 months
  • lines of black dots appeared showing the position of DNA molecules
  • DNA molecules were circular & 1,100 micrometers long
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6
Q

Explain how non-disjunction (Down syndrome) is caused

A
  • non-separation of chromosomes can occur in anaphase I or II
  • gametes with an abnormal number of chromosomes are produced
  • at anaphase I –> 4 affected cells
  • at anaphase II –> 2 affected cells
  • can lead to zygotes/individuals with an extra chromosome / individual has 47 chromosomes;
  • in Down syndrome this would be trisomy 21/extra chromosome 21;
  • increased probability with increased age of mother/ages of parents;

CENTROMETES NOT DIVIDING / INCORRECT SPINDLE ATTACHMENT

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7
Q

Describe 2 examples of codominance.

A
  • Inheritance of ABO blood groups (involves more than 2 alleles being expressed together, e.g. AB)
  • inheritance of sickle-cell anemia (heterozygous individuals have milder symptoms due to the MODERATING INFLUENCE of normal allele (HbA HbS)
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8
Q

Identify two examples of X-linked recessive diseases.

A
  • Red-green colour blindness –> caused by recessive allele of gene for one of the photoreceptor proteins
  • Hemophilia –> inability to control blood clotting leads to bleeding
  • inability to make Factor VII (protein)
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9
Q

Provide an example of an autosomal recessive disease.

A

Cystic Fibrosis
- autosomal recessive allele on CFTR gene, chromosome 7
- produces sticky mucus, clogs airways
- clogs secretory ducts of the digestive system
- respiratory failure
- pancreatic cysts

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10
Q

Provide an example of an autosomal dominant disorder.

A

Huntington’s disease
- mutation to the HTT gene, chromosome 4
- degenerative changes in the brain’s nerve cells
- changes to behaviour, cognition
- heart failure, pneuomonia, symptoms emerge b/w 40-50 years of age

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11
Q

GMO Benefits

A
  • pest-resistance, less insecticides needed
  • longer shelf-life
  • less fuel for farming (reducing ploughing/spraying)
  • increased nutritional value
  • resistance to drought, cold, salinity, disease
  • lack known allergens
  • improved food supply in poor countries
  • less need for land clearing –> reduced costs + carbon footprint
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12
Q

GMO Risks

A
  • non-target organisms affected
  • reduced biodiversity
  • antibiotic resistance genes –> bacteria
  • adverse health reactions
  • cross pollination –> super weeds
  • conflicting regulatory standards
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13
Q

DNA profiling

A
  • DNA of person from a selection of short tandem repeat loci is copied by PCR
  • DNA cut using restriction enzymes
  • gel electrophoresis used to separate DNA fragments
  • pattern of bands is produced in gel
  • analysed for matches b/w child with mother & possible father
  • about half of child’s bands will match father, half will match mother
  • paternity + forensic investigations
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14
Q

Describe amniocentesis.

A
  • sample of amniotic fluid removed from amniotic sac around fetus
  • hypodermic needle inserted into wall of mother’s abdomen + uterus
  • amniotic fluid drawn into syringe
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15
Q

Describe chorionic villus sampling.

A
  • Cells removed from fetal tissues in placenta called chorionic villi
  • higher risk of miscarriage
  • both have risk of infections
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16
Q

Explain the use of karyotyping in human genetics.

A
  • karyotype is number + type of chromosomes in cell
  • karyogram is photograph of chromosomes in cell arranged in homologous pairs
  • cells collected from chorionic villus OR by amniocentesis
  • requires cells in METAPHASE
  • chromosomes are burst + spread & a photo is taken
  • the chromosomes are organised according to size/structure/banding pattern
  • karyotypes are used to identify sex, abnormal chromosome numbers
  • down syndrome is due to the extra chromosome 21
  • may lead to a decision to abort the fetus
17
Q

Describe somatic cell nuclear transfer

A
  • a cell is taken from the udder of a donor sheep
  • diploid nucleus removed
  • unfertilised (haploid) egg taken from another sheep
  • the nucleus was removed
  • fused together w/ pulse of electricity –> zygote
  • embryo implanted in uterus of surrogate
18
Q

Bt Crops

A
  • GMO maize (has insecticide-producing gene from bacterium Bacillus thuringiensis)
  • makes the plant toxic to insects
  • pollen dusts milkweeds
  • affects monarch butterflies
19
Q

Nuclear Accident at Chernobyl

A
  • explosion at nuclear plant in USSR
  • radioactive metals (iodine, caesium) were released
  • spread to dif parts of Europe
  • uranium broken up into particles and escaped
  • thyroid cancer due to radioactive iodine in milk/water
  • leukemia, livestock death, forests affected, fish & caesium
20
Q

Nuclear Bombing of Hiroshima

A
  • atomic bomb
  • leukemia, cancer, mutations, stillbirths
  • people stigmatised
  • long-term effects of radiation were studied
  • most deaths occurred in the first ten years after the bombing
21
Q

Non-Mendelian ratios

A
  • polygenic (e.g. height, skin colour)
  • linked genes
  • recombinant phenotypes due to crossing over
  • codominance of specific alleles (pink flowers)
  • sex-linked effects (colourblindness)
  • environmental influence on inheritance –> epigenetics, methylation
22
Q

Causes of Mutation

A
  • high energy radiation e.g. X-rays, UV, gamma, alpha particles from radioactive isotopes
  • mutagen chemicals e.g. benzene
  • biological e.g. bacteria or viruses
23
Q

Explain the process of gel electrophoresis

A
  • separating mixtures of proteins / fragments of DNA which are charged
  • mixture placed on thin sheet of gel (Acts like molecular sieve)
  • electric field applied to gel by attaching ELECTRODES to both ends
  • particles move based on charges
  • rate of movement depends on SIZE of particles
24
Q

Explain the key stages of PCR

A
  • DENATURATION –> DNA sample heated + strands separated
  • ANNEALING –> cooling + DNA primers attached to 3’ end of target sequence
  • ELONGATION –> heat tolerant TAQ polymerase binds to primers & copies strands
25
Q

Genetic Transfer

A
  • mRNA coding for insulin extracted from human pancreas cells
  • DNA copies of mRNA made using enzyme reverse transcriptase
  • sticky ends made by adding extra G nucleotides to ends of gene
  • plasmids cut open using restriction enzymes –> sticky ends of plasmid = more C
  • insulin gene + plasmid mixed together (base pairing)
  • DNA ligase seals nicks (sugar-phosphate bonds)
  • recombinant plasmids are mixed w/ host ells
  • E coli absorbed
  • E coli cultured in fermenter - makes insulin which is extracted & purified for diabetics