RNA transcription Flashcards

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1
Q

name the differences between RNA and DNA

A
different sugars 
ribose has one more oxygen than deoxyribose
RNA has uracil
DNA is double stranded
DNA is more stable
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2
Q

is the antisense or sense strand transcribed?

A

antisense

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3
Q

is the sense strand or antisense strand identical to mRNA?

A

sense strand

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4
Q

name and describe the steps of transcription

A

Intiation - when RNA polymerase binds to the antisense strand

Elongation - polymerase transcribes the gene

Termination - polyermase stop transcribing

Processing - mature mRNA is formed

export - mRNA leaves the nucleus

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5
Q

what are the types of RNA polymerase?

A

RNA polymerase I, II and III

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6
Q

what does RNA polymerase I code for?

A

rRNA

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7
Q

what does RNA polymerase II code for?

A

mRNA

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8
Q

what does RNA polymerase III code for?

A

tRNA

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9
Q

what is the initiating methionine?

A

ATG

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10
Q

what does the RNA initially bind to?

A

start codon - ATG

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11
Q

what is the promoter region and what does it do?

A

TATA box upstream of the start codon

attaches RNA polymerase II to the gene

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12
Q

what do transcription factors do?

A

proteins that bind to specific DNA sequences and either recruit or block RNA polymerase binding

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13
Q

what regions can transcription factors therefore bind to?

A

enhancer regions - activator proteins bind to increase transcription rate

inhibitor regions - repressor proteins bind to inhibit transcription

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14
Q

what direction does RNA polymerase add bases in?

A

3 prime to 5 prime

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15
Q

where does transcription stop?

A

stop codon

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16
Q

what are the three methods of processing?

A

adding 5 prime cap
polyadenylation
splicing

17
Q

how is the 5 prime cap added?

A

7-methylguanosine

via 5’-5’ triphosphate bridge

18
Q

what is the function of the 5 prime cap?

A

prevents degradation
assists splicing
helps mRNA export and ribosome binding

19
Q

explain how the 3’ polyA tail is added

A

cleavage factors bind to polyadenylation signals and GU rich sequence
PolyA polymerase attaches and added adenine
PolyA Binding Protein binds to tail and accelerates

20
Q

explain how splicing occurs

A
5 snRNP (spliceosome) cleaves splice sites at AGs and GUs and then connects the exons
forms intron ring via GpA bond
21
Q

what does snRNPs stand for?

A

small nuclear ribonucleoproteins

22
Q

what antibiotics target RNA polymerase?

A

Rifampicin
Rifamycin
Streptolydigin