RNA Metabolism Flashcards

1
Q

What structure can RNA molecules fold into?

A

Bulge,Internal Loop, Hairpin

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2
Q

Order the types of RNA from most to least common?

A

rRNA, tRNA, mRNA other forms

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3
Q

Describe the Process of Transcriptional Initiation in E. Coli

A
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4
Q

Describe the Process of Initiation at RNA Pol I?

A
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5
Q

Describe the initiation process at RNA Pol III

A
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6
Q

Process of Initiation at RNA Pol II

A
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7
Q

Actinomycin: Action and Mechanism

A

Intercalates between G and C residues

inhibits transcriptional elongation in pro and eukaryotes

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8
Q

Rifampicin: Action and Mechanism

A

binds the beta subunit of bacterial RNA polymerase

blocks promter clearance

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9
Q

Aplha amanitin

A

comes from a death cap mushroom

inhibits RNA pol II greatly and is a weak inhibitor of RNA pol III

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10
Q

Draw the Nuclear Splicing Mechanism

A
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11
Q

Describe the processing of 3’ mRNA

A
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12
Q

rRNA processing in Eukaryotes

A
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13
Q

rRNA processing in Prokaryotes

A
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14
Q

tRNA processing

A
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15
Q

What occurs in the initiation, elongation, and termination sequences of RNA pol II?

A

Initiation occurs after phosporylation of the C-terminal domain of RNA Pol II by TFIIH

Elongation begins after the synthesis of the initial 60-70 ribonucleotides when TFIIE and TFIIH are kicked off and elongation factors bind

Termination starts with polyadenylation or 3’ end formation

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16
Q

What is the secondary action of TFIIH?

A

TFIIH is involved in transcription coupled DNA-repair subunits of TFIIH interact with the encountered lesion and recruit the whole nucleotide exision repair complex

17
Q

What are the post transcriptional modifications done to rRNA, mRNA and tRNA respectively?

A

rRNA - methylation, nucleolytic cleavage

mRNA - 5’ cap, polyadenylation, removal of introns (nuclear splicing)

tRNA - 5’ and 3’ cleavage, CCA addition, base modification, tRNA splicing