Respiration Flashcards

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1
Q

Define tissue/ cell respiration

A

This is a process by which organic food materials are broken down in a cell to release energy in the form of ATP.

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2
Q

Describe the structure of ATP

A

ATP is a molecule made up of a nitrogen base; adenine, a ribose sugar and three phosphate groups.

Adenine is attached to carbon 1 of ribose sugar while the chain of phosphate groups is attached to carbon 5 of ribose.

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3
Q

True or false;
More energy is obtained from the hydrolysis of ATP to ADP and ADP to AMP than from hydrolysis of AMP.

A

True
This explains why hydrolysis of AMP to release energy isn’t feasible.

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4
Q

By what process is ATP formed;

A

Phosphorylation; in which a phosphate is added to ADP.

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5
Q

Explain the three types of phosphorylation

A

i. Substrate level phosphorylation:
This involves the transfer of phosphate group directly from a high energy compound to ADP to form ATP.

Examples of high energy compounds include 1, 3- bisphosphoglycerate

ii. Oxidative phosphorylation:
This is the process of ATP synthesis using energy from oxidation of compounds such as NADH and FADH2

iii. Photophosphorylation:
This is the process by which ATP synthesis takes place in a cell using energy from light.
E.g. during photosynthesis.

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6
Q

Why is ATP is preferred to other high energy compounds to provide energy for cell metabolism?

A
  • Provides the right amount of energy for cellular needs when hydrolyzed
  • ATP can be moved to any place when need arises
  • Is easily hydrolyzed to provide energy at the right time.
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7
Q

State uses of ATP

A
  • Provides phosphates for phosphorylation
  • Stores energy
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8
Q

Give the uses of energy from ATP in cells

A
  • Enables loading and unloading of sugars in plants
  • Enables translocation of organic food materials in phloem of plants
  • Enables movement of cilia and flagella
  • Enables contraction of muscles
  • Enables active transport of molecules across cell membrane
  • Used for synthesis of compounds and structures e.g. DNA and protein synthesis
  • For activation of chemical compounds, to make them more reactive. E.g. phosphorylation of glucose during glycolysis
  • For Contraction of microfilaments during cell division
    • Powers movement of a sperm cell toward the secondary oocyte
  • Transmission of nerve impulses
  • For secretion of substances such as hormones that are formed in cells
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9
Q

Where does respiration occur in prokaryotic cells?

A
  • Cytoplasm, mesosome
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10
Q

Where does respiration occur in eukaryotic cells?

A
  • Cytoplasm, mitochondrion
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11
Q

What are the three stages of cellular respiration, their sites of occurrence and their conditions?

A
  1. Glycolysis
    Occurs in the cytoplasm
    Anaerobic conditions
  2. Krebs cycle/ tricarboxylic acid cycle
    Occurs in the mitochondrial matrix
    Aerobic conditions
  3. Electron transport chain
    Occurs in the cristae of the mitochondrion
    Aerobic conditions
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12
Q

Define glycolysis

A
  • This is a series of enzyme controlled reactions that involve the splitting of a single glucose molecule to form two molecules of pyruvate with release of two ATP molecules
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13
Q

Describe the process of glycolysis

A
  • Glucose; phosphorylated to form glucose-6-phosphate to raise its energy level and prevent it from leaving the cell. Reaction is catalyzed by the a kinase enzyme.
  • The glucose-6-phosphate; isomerized to form fructose-6-phosphate. Reaction catalyzed by isomerase enzyme.
  • Fructose-6-phosphate; phosphorylated to form fructose-1, 6- bisphophate. Reaction catalyzed by enzyme kinase.
  • The fructose-1, 6-bisphosphate is unstable and splits to form two 3 carbon compounds which are isomers; dihydroxyacetone phosphate and glyceraldehyde-3-phosphate. Reaction is catalyzed by enzyme aldolase.
  • Dihydroxyacetone phosphate; isomerized to glyceraldehyde-3- phosphate. The reaction is catalyzed by enzyme isomerase.
  • Thus, each glucose molecule is cleaved to form 2 molecules of three carbon compound glyceraldehyde-3-phosphate.
  • Each of the glyceraldehyde-3-phosphate is oxidized by oxidized Nicotinamide adenine dinucleotide (NAD+) and then phosphorylated to to form 1,3-bisphosphoglycerate. Reaction catalyzed by kinase enzyme.
  • Two molecules of reduced nicotinamide adenine dinucleotide (NADH+H+) are formed. Reaction is catalyzed by dehydrogenase enzyme
  • Each molecule of 1, 3-bisphosphoglycerate is used to from an ATP molecule during substrate level phosphorylation of ADP.
  • Two molecules of 3-phosphoglycerate (PGA) are formed. Reaction is catalyzed by phosphoglycerokinase enzyme.
  • Each of the PGA molecules isomerizes to form 2-phosphoglycerate.
  • The molecules now lose a water molecule under catalysis of enzyme enolase to form 2 molecules of phosphoenolpyruvate (PEP)
  • A phosphate group is transferred from each of the PEP molecules to ADP, forming 2 molecules of ATP, during substrate level phosphorylation.
  • Two molecules of pyruvate are formed. Reaction is catalyzed by pyruvate kinase enzyme.
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14
Q

What is the significance of glycolysis?

A
  • Formation of ATP used to power cell activities
  • Formation of (NADH+H+) from which more energy is extracted during the electron transport system
  • Formation of pyruvate from which more energy can be extracted either in aerobic conditions or anaerobic conditions during Krebs cycle.
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15
Q

Describe the Krebs Cycle

A

•During aerobic conditions, pyruvic acid is transported across the mitochondrial membrane into the matrix where it is decarboxylated.
• First, the pyruvate is decarboxylated and then oxidized to form acetate, carbon dioxide and (NADH+H+).
• The acetate combines with coenzyme A to form acetyl coenzyme A, making the acetyl group very reactive.
• Acetyl coenzyme A now joins the Krebs cycle where it is further oxidized to release more energy.
• In the Krebs cycle, acetyl CoA reacts with oxaloacetate a 4C compound to form citrate, a 6C compound.
• Coenzyme A is reformed and may be used to combine with another acetate molecule from pyruvate.
• Citrate isomerises to form isocitrate, a more reactive molecule by addition and removal of a water molecule.
• The isocitrate is oxidized by (NAD+) to (NADH+H+) and then decarboxylated by loss of carbon dioxide to form α-ketoglutarate
• The α-ketoglutarate loses a carbon dioxide molecule and oxidized by (NAD+), the remaining product reacts with coenzyme A to form a 4C compound, succinyl CoA, which is unstable.
• The CoA is displaced, ATP is formed and a more stable 4C compound, succinate forms.
• The succinate is oxidized by removal of two hydrogen atoms by (Flavine adenine dinucleotide) FAD, to form FADH2. Fumarate is formed.
• Addition of a water molecule to the fumarate results into formation of malate, a 4C compound.
• Malate is oxidized by NAD+ to regenerate oxaloacetate. (NADH+H+) is also formed

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16
Q

How many NADH molecules are formed from the Krebs Cycle per pyruvate molecule?

A

3

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17
Q

How many FADH2 molecules are formed from the Krebs Cycle per pyruvate molecule?

A

1

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18
Q

How many ATP molecules are made in the Krebs cycle?

A

2

19
Q

What is the role of coenzyme A?

A

• Activates acetate so that more energy can be obtained from it
• Transfers the acetyl group formed from pyruvate to combine with 4C compound oxaloacetate, forming 6C compound citrate. This reaction is catalysed by the enzyme citrate synthatase.
• Provides a pathway by which fatty acids and proteins can be used as respiratory substrates via a central link of acetyl coenzyme A

20
Q

State the importance of the Krebs cycle

A
  • Brings about degradation of macromolecules; 3 carbon pyruvate is broken down to carbon dioxide
  • It is a source of hydrogen atoms which are transferred to the electron transport system so that more energy can be harnessed from them
  • It is a valuable source of intermediate compounds used in the manufacture of other substances e.g. fatty acids, amino acids and chlorophyll
21
Q

State similarities between glycolysis and Krebs cycle

A
  • In both, NADH+H+ is formed
  • In both, ATP is formed
  • Both involve reduction in number of carbon atoms of initial substrate
  • Both are enzyme catalysed
  • Both occur in living cells
22
Q

Give differences between glycolysis and Krebs cycle

A

GLYCOLYSIS
- Electron acceptor FAD not involved
- Carbon dioxide not formed
- Occurs in the cytoplasm of the cell
- Doesn’t require oxygen availability to occur
- Does not involve CoA

KREBS CYCLE
- Electron acceptor FAD involved
- Carbon dioxide formed
- Occurs in mitochondrial matrix
- Requires oxygen to occur
- Involves coenzyme A

23
Q

Where does the electron transport chain occur?

A

Inner membrane of the mitochondria

24
Q

Describe the electron transport system

A
  • Two hydrogen atoms are removed from an intermediate compound and taken up by a hydrogen carrier NAD which is thereby reduced
  • The hydrogen atoms then pass to a second carrier FAD which in turn is reduced and NAD is re-oxidized
  • Sufficient energy in this transfer is released for synthesis of an ATP molecule
  • The oxidation-reduction process is repeated with cytochrome and cytochrome oxidase
  • The chain of reactions yields three molecules of ATP
25
Q

Account for the number of ATPs formed per glucose molecule

A

GLYCOLYSIS
2 NADH x 3 = 6 ATP
2 ATP
TOTAL: 8 ATP

KREBS CYCLE
2 FADH x 2 = 4 ATP
6 NADH x 3 = 18 ATP
2 ATP
TOTAL: 24 ATP

PYRUVATE DECARBOXYLASE (link reaction)
2 NADH x 3 = 6 ATP

TOTAL
38 ATP

26
Q

Explain why the actual yield of ATP is less than 38

A

i. The inner mitochondrial membrane allows some protons to re-enter the matrix without passing through ATP-generating channels.

27
Q

Define anaerobic respiration

A

This is a process by which organic materials such as sugars are broken down to release ATP without oxygen.

28
Q

Why is the yield of ATP in anaerobic respiration significantly lower than that in aerobic respiration?

A

The ATPS are formed exclusively by substrate level phosphorylation during glycolysis, for which only 2 ATPs are formed per glucose molecule as compared to the 38 ATPs expected in aerobic conditions.

29
Q

What are the two types of fermentation?

A

a) Lactic acid fermentation.
b) Alcohol fermentation (plant & fungi cells)

30
Q

What occurs during lactic acid fermentation?

A
  • In anaerobic conditions, the pyruvate formed from glycolysis is reduced directly by NADH to form lactic acid (lactate).
  • No carbon dioxide is formed.
  • The NAD+ formed enables continuation of glycolysis.
31
Q

True or false;
Carbon dioxide is formed in both lactic acid fermentation and alcohol fermentation

A

False
No carbon dioxide is formed in lactic acid fermentation.
(Lactic acid and pyruvate are both 3C compounds while Ethanol is a 2C compound hence carbon dioxide is only formed in alcohol fermentation)

32
Q

What happens to excess lactate after strenuous exercise.

A

It is transported gradually to the liver where in presence of oxygen, it can be converted back to pyruvate in liver cells.

33
Q

What is the significance of lactic acid fermentation?

A
  • Enables rapid formation of ATP for muscle contraction in skeletal muscles when oxygen is scarce
  • Lactic acid fermentation in certain fungi and bacteria used in dairy industry to make cheese and yoghurt.
34
Q

What are the two steps of forming ethanol in alcohol fermentation?

A

i. Pyruvate is decarboxylated to give ethanal (acetaldehyde) [toxic] and carbon dioxide. Reaction is catalysed by pyruvate decarboxylase.
ii. The acetaldehyde formed is then reduced by NADH to form ethanol and NAD+. Reaction catalysed by alcohol dehydrogenase.

  • The NAD+ that is regenerated is essential for the continuation of glycolysis.
35
Q

What is the significance of alcohol fermentation?

A
  • Enables brewing of alcohol using yeast cells
  • Carbon dioxide produced by baker’s yeast allows dough/bread to rise
36
Q

What are the industrial applications of fermentation?

A
  • In brewing industry, fermentation of sugars results into formation of alcoholic drinks like wines and spirits
  • In baking industry, yeast fermentation results into production of carbon dioxide which rises the dough
  • Industrial lactic acid fermentation results into formation of yoghurt and cheese
  • Anaerobes such as bacteria are used in sewage treatment plants to break down solid and semi-solid waste.
37
Q

State similarities between aerobic respiration and fermentation in cells

A
  • ATP is produced in both
  • In both, glycolysis results into formation of pyruvate
  • In both NAD+ oxidizes glucose to form pyruvate
  • Both involve phosphorylation of glucose to raise its energy level
38
Q

State differences between aerobic respiration and fermentation in cells

A

AEROBIC RESPIRATION
- Requires oxygen for ATP formation
- Occurs in cytoplasm and mitochondria
- Glycolysis, Krebs cycle and ETS involved
- Water formed
- Acetyl CoA formed as an intermediate product
- Net production of 38 ATPs per glucose molecule

FERMENTATION
- Does not require oxygen for ATP formation
- Occurs in cytoplasm
- Glycolysis only involved
- Water not formed
- Acetyl CoA not formed as an intermediate product
- Net production of 2 ATPs per glucose molecule

39
Q

How is cellular respiration regulated?

A
  • Negative feedback inhibition mechanism. During this mechanism, the end product of a metabolic pathway becomes an allosteric inhibitor to an enzyme that catalyses an early step in the series of metabolic reactions.
  • Negative feedback inhibition mechanism prevents cells from wasting energy and vital intermediates (metabolites).
40
Q

What external factors affect the rate of respiration?

A

a) Temperature
- Low temperature results into increase in respiration rate. To provide much needed heat to ensure optimum temperature for enzyme activity. Extremely low temperature will result into decrease in respiration rate
- High temperature generally results into low respiration rate. But beyond high critical temperature of an organism, further increase in temperature results into increased metabolic rate (respiration rate).

b) Body size
- Smaller organisms with a larger surface area to volume ratio lose heat faster than larger organisms thus have a higher respiration rate.

c) Level of activity
- More active organisms have a higher respiration rate to enable supply of much needed ATP as compared to less active ones.

d) Growth
- Organisms or parts of organisms that are actively undergoing growth have a higher respiration rate as compared to dormant organisms or those in senescence.

41
Q

Define respiratory quotient

A

This is a measure of the ratio of carbon dioxide evolved to the oxygen consumed by an organism at the same time period during respiration.

42
Q

Why do fats have an RQ value of less than 1?

A

Fats have a lower proportion of oxygen to carbon thus require more oxygen for complete oxidation during respiration.

43
Q

Why don’t proteins have a uniform RQ value?

A

Due to variation in composition of proteins.

44
Q

What does an infinite RQ value or one greater than 1 imply?

A

Anaerobic respiration occured