Quiz 6 Flashcards
(21 cards)
The DNA can be degraded by enzymes called
nucleases
Cuts DNA anywhere and will degrade your DNA samples
non-specific nucleases
Cuts DNA at the specific sequences and is often used for cloning in molecular biology (often called restriction enzymes)
specific nucleases
positively charged ion (cation) that has a net positive charge of +2 (divalent).
divalent cation
an inorganic ion necessary for an enzyme to function
cofactor
What do nucleases need to cut DNA?
Optimum temperature
Optimum pH
Mg2+ or Mn2+ cations as cofactors
what do we do to stop nucleases from cutting DNA?
Stably store DNA at low temperature (freezing)
Maintain a pH of 8 by storing DNA in TE buffer which contains a strong buffering reagent (Tris)
Store DNA in TE buffer which also contains an agent which binds divalent cations (EDTA) thus preventing their use as cofactors
(containing essential genes for cell metabolism)
circular DNA
(Extra-chromosomal DNA which contains genes for special functions such as antibiotic resistance)
plasmids
contain a restriction site that can be cut to allow foreign DNA to be inserted within it
engineered plasmids
do not carry foreign DNA
empty vectors
contains DNA from another biological source
cloning vector
works by binding divalent cations
Ethylenediaminetetraacetic acid
Store the isolated DNA in TE buffer
DNA storage
DNA will separate from the lysis buffer with ethanol
DNA precipitation
Chemical process of breaking cells open to expose nuclear DNA using the lysis buffer
cell lysis
Physical process of breaking up the tissues to release cells. We will use a mortar and pestle to grind the calf liver in liquid nitrogen
homogenizing
the material of which the chromosomes of eukaryotes are composed
chromatin
a threadlike structure of nucleic acids and protein found in the nucleus of most living cells, carrying genetic information in the form of genes.
chromosome
a structural unit of a eukaryotic chromosome, consisting of a length of DNA coiled around a core of histones.
nucleosome
any of a group of basic proteins found in chromatin.
histones