Purine and Pyrimidine Flashcards

1
Q

Initial nucleotide product in purine synthesis?

A

IMP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Initial nucleotide product in pyrimidine synthesis

A

UMP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

In what form is I converted to G and A?

A

As a monophosphate

IMP –> AMP and GMP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

In what form in U converted to C?

A

As a triphosphate
UTP –> CTP
CTP synthetase

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

PRPP?

A

Activated form of ribose-5-phosphate

First step in synthesis of purines is to activate the ribose sugar –> PRPP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

PRPP Synthase

A

Enzyme that forms PRPP
Allosterically activated by Pi

Allosterically inhibited by Purine ribonucleotides (AMP, GMP, IMP, etc)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Where does Purine synthesis start and where does it end?

A

Starts at PRPP (build on activated sugar)

Ends at IMP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

MOST important regulated step in purine synthesis?

A

First step
Glutamine phosphoribosyl pyrophosphate amidotransferase
==> enzymatic addition of nitrogen to from glutamine to PRPP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Activators of glutamine phosphoribosyl pyrophosphate amidotransferase?

Inhibitors?

A

PRPP

AMP, GMP, IMP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Sources of atoms for purine synthesis?

A
Glutamine
Glycine
Aspartate
also requires...
ATP
THF - methotrexate target!
CO2
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

So once we have IMP we need to make AMP and GMP

A

GTP fuels AMP production
ATP fuels GMP production

AMP inhibits AMP produciton
GMP inhibits GMP production

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Pyrimidine synthesis starts at?

Ends at?

A

CO2 (ATP) and Glutamine

UMP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Key regulatory step in pyrimidine synthesis?

A
First step (build base alone)
Carbamoyl phosphate synthetase II

Inhibited by UTP
Activated by ATP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What makes CPSI and CPSII different?

A

Location - cytosol vs mito
Source of N - ammonia vs glutamine
Regulation - N-acetylglutamate vs. ATP (UTP)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Enzyme that converts ribonucleotides to deoxy?

A

ribonucleotide reductase

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Potent inhibitor of ribonucleotide reductase (and thus inhibitor of dNTP synthesis?)

A

dATP

17
Q

How do we make dTMP?

A

From dUMP
via
Thymidylate synthase

18
Q

Who helps us with conversion of dUMP to dTMP?

A

THF (T is just U with a methyl)
- Target of methotrexate

5-fluorouracil also targets this conversion via fucking with some intermediary

19
Q

Purine degradation

starts with

A

AMP or GMP

20
Q

Purine degradation ends with

A

uric acid

21
Q

Adenosine deaminase deficiency leads to

A

SCID

because we have buildup of dATP which inhibits ribonucleotide reductase

22
Q

Gout

A

Build-up of uric acid - primarily from undersecretion but could also be due to overproduction and subsequent degradation of purines- treat by blocking xanthine oxidase

23
Q

xanthine oxidase

A

converts xanthine to uric acid - target of gout treatment

24
Q

Lesch Nyhan

A

X linked recessive
deficiency of HGPRT so can’t convert hypoxanthine to IMP or guanine to GMP

Fucked up purine salvage pathways :( –> increased levels of PRPP and decreased IMP and GMP causing increased de novo purine synthesis

excessive production and accumulation of uric acid –> nuerologic

25
Q

A 6 year old child presents to clinic for evaluation of mental retardation, self mutilation, and painful swelling of joints –> disorder is?

A

failure of recycling / salvage purine bases
Lesch Nyhan
X-linked recessive
build up of uric acid :(