Proteins Flashcards
Structures
Primary-linear sequence of a.a
Secondary-spacial arrangement by twisting
Tritiary-3D structure
Quaternary- spacial arrangement of 2 or more polypeptide chains as subunits
Primary structure
*largely responsible for its function
*abnormalities in a.asequence causes genetic diseases
*determine physical and chemical properties
A.a held together by which bond
Peptide bond
Bond which act as a cementing material bw a.a
Peptide bond
Dipeptide has 2 peptide bond.true?
No
Dipeptide-2 a.a and 2 peptide bond
Polypeptide-more than 10
Configuration of peptide bond
Trans
Structure of peptide
Left n terminal ,korch a.a ,c terminal
If an,ine ,ate present make it yl except at c terminal
*2 adjacent carbon atom present at .36 nm
3 steps to determine primary structure
1,a.a composition determine
2,polypeptide smaller fragments determine
3,a.a sequence determine
Determination of a.a composition
*proteins-hydrolyse(acid/alkali/enzyme) to form a.a
*enzyme used-pronase( mixture of non specific proteolytic enzyme)
*separated by chromatographic techniques
Properties of proteins
Soluble in colloidal soln than true soln bcz of its larger size of particles
Properties of proteins
Soluble in colloidal soln than true soln bcz of its larger size of particles
Precipitation of proteins, properties
Proteins, hydration of polar group us there
So exist in colloidal solutions
By dehydration/ neutralization it can be ppted
Types of pptn of proteins
1,At pl
2,By salting out
3,By salts of heavy metals
4, By organic solvent
5,By alkaloid reagents
Pptn at pl
Generally least soluble
Eg,casein easly ppted at pH of pl
Pptn by salting out
Addtn of neutral salts such as nh3 sulfite/ na sulfate
Principle-dehydration of protein molecule by salt
Protein protein interaction^-molecular aggregation-precipitation
Pptn Amount of salt depends on size of particles
*size/weight ^lower salt is needed
Eg,globulin( half saturation)
Albumin (full saturation)
Pptn by salts of heavy metals
Heavy metals(+ve charge) +protein solution in alkaline medium(-ve charge) =ppt formation
Eg,lead,hg ,fe,zn,cd
By organic solvent
Good protein ppting agents
Dehydrate protein by removing h20 envelope and ppt
Eg alcohol
By alkaloid agents pptn
Proteins trichloroacetic acid,sulphosalicykic,phosphotungstic acid,picric acid,tannic, phospho molybdic
By addtn of acids, proteins (cations) ppted by anionic to form;
Protein sulphosalicate
Protein tungstate
Protein picrate
Denaturation
-disorganization of native Protein
-loss of 2o,3o and Quaternary structure
-change in physical, chemical and biological ppprty
Agents
Physical agents-heat, uv radiation, violent shaking, x rays
Chemical agents-acids ,alkalis,organic solvent, salts of heavy metals, urea, salicylate
Characteristics of denaturation
-native helical structure is lost
-1o structure with peptide bond remain intact
-loss Biological properties
-denatured become insoluble in which earlier is soluble
-viscosity (eg honey) ^,surface tension (eg h20)decrease
-is irreversible bt sometimes reversible by renaturation
-is more easily digested
-cannot be crystallized