Proteins Flashcards
what monomers are proteins made up of ?
amino acids
structure of amino acids
central carbon, amino acid , carboxyl group and R group
what does the R group represent ?
all the variable group - 20 options
what bond is formed between amino acid ?
peptide bond
how are dipeptides formed ?
two amino acids join by a condensation reaction
how are polypeptide formed ?
condensation of many amino acids
Ionic bond
electrostatic interaction between oppositely charged ion - may often be broken by changing the pH
hydrogen bonding
a hydrogen atom is shared by two other atoms
disulphide bond
strong covalent bond formed by the oxidation of - SH groups of two cysteine side chains
primary structure of protein
sequence of amino acids that make up the polypeptide chain - held together by peptide bonds
secondary structure of protein
- sequence of amino acids causes parts of a protein molecule to bend into alpha helix shapes or fold into beta pleated sheets
- held by hydrogen bonds
tertiary structure of protein
- further folding of the secondary structure to form a unique 3D shape
- held in place by ionic, hydrogen and disulphide bonds
quaternary structure of protein
a protein arises when two or more polypeptides become held together forming a complex, biologically active molecule
biuret test for proteins
- by adding an equal quantity of sodium hydroxide solution to the test solution
- a few drops of 0.5 % copper ( II ) sulphate solution
- if a colour changed from pale blue to lilac than a protein is present
examples of proteins
collagen and haemoglobin
Fibrous protein
- long, coiled polypeptide chain
- single collagen molecules has 3 polypeptide chains
- held together by covalent and hydrogen bonds
structure of collagen
- three long polypeptide molecules coiled together to form triple helix
- every 3rd amino acid is glycine + 2 amino acids are mostly proline and hydroxy proline
- covalent bonds form between the polypeptide chains together with many hydrogen bonds
Globular protein
- spherical and compact
- polypeptide chains wind in a way so hydrophilic amino acids are at the surface and hydrophobic amino acids are at its core - soluble in water
structure of haemoglobin
- respiratory pigment found in our red blood cells
- consists of 4 polypeptide chains, each bound to an iron - containing haem group
What does iron in the haem group binding to oxygen cause ?
a change in shape of the haemoglobin molecule, making it easier for the further oxygen molecules to bind