Prenatal Genetics Flashcards
Gestational Age
date of pregnancy from LMP; includes first two weeks of ovarian cycle
Fertilization Age
date of pregnancy from fertilization; GA - 2 weeks
1st Trimester
1 - 13 weeks
2nd Trimester
14 - 27 weeks
3rd Trimester
28- 40 weeks
Gravida
pregnancies
Para/Parity
completed pregnancies >20w
GTPAL
gravida, term (deliveries >37w), preterm (deliveries between 20-37w), abortions (miscarriages and terminations <20w), living
Folic Acid Supplementation Recommendations
starting prior to conception, 400mcg daily or 4mg daily if prior history of ONTDs
% Unplanned Pregnancies
45%
Carrier Screening
genetic testing to identify couples who are at risk of having a child with various genetic conditions (usually AR, some XL)
Common Conditions on Carrier Screening
- cystic fibrosis
- spinal muscular atrophy
- ethnicity-based conditions (Tay-Sachs, Gaucher, Canavan, familial dysautonomia, hemoglobinopathies)
- fragile X syndrome (not standard)
Cystic Fibrosis
- carrier frequency: 1/25
- F508del occurs in 70% of cases
- ACOG and ACMG recommend core panel of 23 mutations that identifies 49-98% of carriers
- present on NBS via immunoreactive trypsinogen testing
Spinal Muscular Atrophy
- carrier frequency: 1/40
- 95% of cases due to homozygous deletions
- 2% de novo cases
- ACOG and ACMG recommend SMA carrier screening for all couples
- some labs test for SNP in intron 7 (g.27134T>G) to determine if copy number 2 in cis or trans; presence of SNP increases chance they’re in cis
Ashkenazi Jewish Conditions
- ACOG recommends screening for 4 conditions (Canavan, CF, familial dysautonomia, TSD - DNA and enzyme)
- ACMG recommends screening for 11 conditions (Bloom, Canavan, CF, familial dysautonomia, Fanconi anemia C, Gaucher, mucolipidosis type IV, Niemann-Pick A/B, SMA, TSD - DNA and enzyme)
Tay Sachs Disease
- AJ carrier frequency: 1/30
- Cajun/French Canadian carrier frequency: 1/50
- 3 HEXA mutations account for up to 98% of TSD in AJ
- enzyme testing detects 98% of carriers regardless of ethnicity
- when doing enzyme assay, important to do leukocytes on pregnant women and women on OCP
Canavan Disease
- carrier frequency: 1/57
Familial Dysautonomia
- carrier frequency: 1/30
- most individuals homozygous for c.2204+6>C
Gaucher Disease (type 1)
- carrier frequency: 1/10-1/15
Hemoglobinopathies
- structural hemoglobinopathies: HbS, HbC, HbE
- thalassemias
- carrier frequency for sickle cell in African Americans: 1/10
- for patient at increased rick for hemoglobinopathy given ethnicity, both CBC and hemoglobin electrophoresis should be performed
- ethnic backgrounds with increased risk: African, Mediterranean, Middle Eastern, Southeast Asian, West Indian
- usually detected on NBS
Fragile X Syndrome
- 1/260 females are carriers
- normal: <45 repeats
- intermediate/gray zone: 45-54 repeats
- premutation: 55-200 repeats
full mutation: >200 repeats’ - AGG interruptions usually appear every 9-10 CGG repeats and can modify risk
- ACOG and ACMG support offering testing to women with family history of FX-related disorders, women with a personal history of POI or elevated FSH <40y, women who request carrier screening
Expanded Carrier Screening
- technologies vary between full-exon sequencing and targeted genotyping of predefined pathogenic variants
- as per ACOG, ethnic-specific, pan-ethnic, and expanded carrier screening are acceptable options
% Pregnancies with major anatomic malformations
2-3% with cardiac and GU anomalies most common
Most common genetic cause of miscarriage and birth defects
aneuploidy