POST TRANSCRIPTIONAL CONTROL Flashcards

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1
Q

What are the functions of RNA capping?

A

Stabilizes RNS and protect from 5’ to 3’ degradation

Enhances translation

facilitates and mediates nuclear transport

mediates the splicing of the first intron

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2
Q

Whatis mRNA processing?

A

It is the removal of introns from a pre-mRNA to form mature mRNA

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3
Q

What are introns?

A

Portion of pre-mRNA that is removed via splicing and not found in mature mRNA

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4
Q

What are exons?

A

The coding sequemce found in mature mRNA

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5
Q

The splice sites are found where?

A

At the intro/exon junction

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6
Q

What are the non coding exons called?

Whaere are they found?

A

Untranslated region (UTR)

At 5’ and 3’ ends

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7
Q

UTRs may contain what? Give an example

A

Regulatory sequences i.e polyadenylation site at 3’ UTR

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8
Q

Name and describe the steps of maturation of mRNA

A

1) Capping at the 5’ end: Stabilizes, protects, enhances translation, nuclear transportation and splicing of first intron
2) Splicing: removal of introns
3) 3’ end processing: cleavage and polyadenylation of polyA site.

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9
Q

What are the sequences that defines an intron?

A

5’ (donor) site - GU

3’ (acceptor) site - AG

Branchpoint or branch site - A

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10
Q

What is found btw the branchpoint and the 3’ splice site?

A

Polypyrimidine stretch containing many Cs and Us

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11
Q

In a splicing rxn, bond btw what and what is first broken?

A

Btw the G of the 5’ splice site and exon 1

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12
Q

The broken off G combines with the branchpoint and together form what?

A

Intron Lariat

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13
Q

The bond btw - and - in the second step of splicing is broken and the third step is what?

A

G of the 3’ splicing site and exon 2 is broken

The two exons are joined and the intron is discarded.

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14
Q

Where does splicing take place?

A

In spliceosomes

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15
Q

S spliceosome is composed of what?

A

Pre-mRNA in its various splicing stages, snRNPs and other factors that catalyze splicing rxn.

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16
Q

snRNPs are composed of what?

A

snRNAs and associated proteins.

17
Q

What happens at the 3’ end processing?

A

Cleavage and polyadenylation at the polyA site

18
Q

Polyadenylation site consist of?

A

1) Hexanucleotide signal or polyadenylation signal which is usually AAUAAA
2) A cleavage site - CA

30 A downstream GU-rich sequence

19
Q

What is the poly adenylation sequence?

A

AAUAAA

20
Q

Fill the blank:

The RNA is cut after the - of the cleavage site and polymerase adds -

A

CA and polymerase adds polyA tail