Physiology 2 Flashcards
What type of bonds link the individual amino acids in a protein sequence?
Covalent peptide bonds
What are the two most common secondary structures of proteins?
Alpha helix
Beta pleated sheet
What type of bonds produce a protein’s secondary structure?
Hydrogen bonds
What type of bonds produce a protein’s tertiary structure?
Hydrogen bonding
Ionic bonding
Hydrophobic interactions
Covalent disulphide bonding (cysteine)
Contrast the ‘lock and key’ and the ‘induced fit’ models of enzymatic action
Lock and key requires ‘perfect fit’
Induced fit suggests conformational change of the enzyme occurs as a result of the substrate.
Name some metal ion co-factors for enzymatic reactions and their associated enzymes
Mg2+: Hexokinase
Zn2+: Carbonic anhydrase
Fe2+: Cytochrome oxidase
Name some organic co-enzymes and their associated reactions
Co-enzyme A: Acyl group reactions
Co-enzyme B12: Alkyl group reactions
What effect does temp have on rate of enzymatic reaction?
Increased temp -> increased rate until enzyme denatured
What effect does pH have on rate of enzymatic reaction?
Enzymes are pH-specific. H+ ion concentration affects Hydrogen bonding and amino acid charge leading to conformational change.
Michaelis-Menten equation?
V0 = Vmax[S] / Km + [S]
Where V0=initial reaction velocity
Vmax=max velocity
Km=Michaelis constant
[S]=substrate constant
How is the Michaelis constant derived?
k-1 + k2
/ k1
E + S -> ES (k1)
ES -> E + P (k2)
ES -> E + S (k-1)
What happens to the Lineweaver-Burke slope when a competitive inhibitor is added to an enzymatic reaction?
Increase in slope around 1/Vmax (point of crossing y-axis)
What happens to the Lineweaver-Burke slope when a non-competitive inhibitor is added to an enzymatic reaction?
Increase in slope from -1/Km (where meets x-axis)
Define an allosteric enzyme
Enzyme that has multiple subunits and exhibits conformational change (and subsequent effects on substrate binding) in the presence of additional molecules
What effect does allosteric binding have on Michaelis-Menten characteristics?
The hyperbolic curve is replaced by a sigmoid curve.
Outline the fluid compartments of the body
70kg male (standard)
60% water - 42L
2/3 ICF - 28L
1/3 ECF - 14L
In the ECF: Intravascular - 4L (9.5%) Interstitial - 9L (21%) Transcellular - 1L (2%) Bone/connective tissue - 1L (2%)
How much of the intravascular volume is accounted for by plasma?
55%
What is an approximate calculation for total intravascular volume?
70-75ml/Kg
Contrast osmolality and osmolarity
Osmolality: osmol/Kg water
Osmolarity: osmol/L water (temperature dependent)
What is a normal plasma osmolality?
280-305 mOsmol/Kg