Pharmacology Flashcards
Drug targets are usually?
Proteins
What do anti-acid drugs target?
Protons
Types of protein targets?
Receptors
Enzymes
Ion channels
Transporters
What is a ligand?
The endogenous molecule that binds to a receptors to illicit a response
Examples of ligands?
Neurotransmitters
Hormones
Growth factors
Cytokines
Metabolites
How do ligands cause a response?
Ligand binds receptor
Receptor activated
Signal transmitted from outside cell to inside cell
Signal relayed to effector proteins via signalling pathway
Effector mediates response
Signals can be relayed from a receptor via?
Protein kinases
GTP-binding proteins or G-proteins
Seconds messengers
Calcium ions
What do protein kinases do?
Add phosphate molecules to amino acids in proteins (protein phosphorylation)
Enzyme function can be regulated by addition or removal of a covalently bonded phosphate group
Two main types of protein kinases?
(a) serine/threonine kinases
(b) tyrosine kinases
How does protein phosphorylation change protein shape?
Each phosphate group carries a 2- charge
Binding to an amino acid causes surround positively charged amino acids to move closer causing a conformational change to the proteins shape
How can phosphorylation affect proteins?
1) change to activity- can affect binding of ligands to proteins, change in shape can effect intrinsic activity
2) mask binding sites- disrupting protein-protein interactions
Picture of the protein kinase cascade
What activity to G-proteins have?
GTPase activity
What is GTPase activity?
An enzymatic activity able to hydrolyse GTP to GDP
What can G-proteins bind?
GTP
GDP
How to tell if G-protein is active or inactive?
Active if bound to GTP
Inactive if bound to GDP
What are second messengers?
Small molecules and ions that relay signals received by cell-surface receptors to effector proteins
Examples of second messengers?
Cyclic AMP (synthesised from ATP by adenylyl cyclase)
Cyclic GMP (synthesised from the nucleotide GTP using guanylyl cyclase)
Nitric oxide
Calcium
Four major classes of receptors?
G Protein-couples receptors (GPCR)(metabotropic)
Ligand gated ion channels (ionotropic)
Enzyme-linked receptors
Nuclear receptors
What is a G protein-coupled receptor?
Ligand binding to receptor activates a G-protein which then activates or inhibits an enzyme or ion channel
What is a ligand gated ion channel?
Ligand binding to ion channel causes it to open or close. Conformation change takes place
What are enzyme-linked receptors?
Ligand binding to the receptor activates the intrinsic enzymes activity of the receptor or associated enzyme. Conformation change takes place
What are nuclear receptors?
Intracellular receptors. Ligand binding activates the receptor which then acts as a transcription factor to alter gene expression
What is steady state?
When the rate the drug enters the plasma is equal to its clearance from plasma
How to calculate constant infusion rate?
Maintenance dose rate/clearance from single IV dose
How many half-lives until steady state is reached?
~5
What can be done if steady state needs to be reached sooner?
Use a loading dose
How to calculate loading dose?
Steady state X volume of distribution
How to calculate steady state with an infusion?
Maintenance dose rate/clearance
How to calculate steady state with an oral drug?
Bioavailability X Maintenance dose rate/clearance
What else needs to be considered with steady state when using intermittent dosing?
Variability of drug concentration
Must be above minimum effective concentration and below minimum toxic concentration
General dosing regimens in relation to half-life?
<30 mins- difficult to maintain therapeutic concentrations
30mins- 8 hours- based upon range of therapeutic index and dosing interval convenience
8 hours -24 hours- most desirable half-life, usually given every half-life
>24 hours- usually once daily, sometimes every several days. Delays in reaching steady state
What is the structure of a GPCR?
Single polypeptide chain
Contain seven alfa-helical transmembrane domains
All are glycoproteins
Why is the 3rd intracellular loop and C-terminal tail of GCPRs important?
Highly variable in length and sequence
Responsible for G protein interaction
Contain sites of phosphorylation
Subunits of a G protein?
Alpha
Beta
Gamma
Which subunits of a G protein form a complex?
Beta and gamma
Form beta-gamma complex, a stable dimer
Which subunits of a G protein associate with the plasma membrane?
Alpha and gamma
What G protein subunit does GTP/GDP bind to?
Alpha
It has GTPase activity
How does GPCR signalling work?
1) hormone binds to receptor and causes conformation change in receptor
2) activated receptor binds to alpha subunit of G protein
3) binding causes conformational change in alpha subunit, GDP dissociates and is replaced by GTP
4) alpha subunit dissociates from beta-gamma complex
5) alpha subunit binds to effector protein activating or inhibiting it
What is the effector protein for Gs?
Adenylyl cyclase
What does Gs stand for?
Stimulatory
What is the second messenger for Gs?
Increased cAMP
What does Gi stand for?
Inhibitory
What is the effector protein for Gi?
Adenylyl cyclase
What is the second messenger for Gi?
Decreased cAMP
What is the effector protein for Gq?
Phospholipase C
What are the second messengers for Gq?
IP3 and DAG
Examples of GsPCRs and drugs that bind?
B-receptors- salbutamol, propranolol
H2- ranitidine
Glucagon
Some 5HT- amitriptyline
What does cAMP activate?
Protein kinase A
The Gs protein is activated by which toxin?
Cholera
What do phosphodiesterase do?
Turn cAMP to 5’AMP
Examples of GiPCRs and drugs that bind?
Alpha-2 clonidine
Opioid receptor codeine
Some 5HT sumatriptan
What toxin inactivates Gi?
Pertussis
What does the beta-gamma complex do in GiPCRs/GsPCRs?
Regulates ion channels
Which is faster? G-protein gated ion channels or ligand gated ion channels
Ligand gated
Examples of GqPCRs?
Some 5-HT
Adrenergic alpha-1
Vasopressin type 1
Angiotensin II type 1
H1
M1 M3 M5
Examples of drugs that target GsPCRs?
Propranolol
Salbutamol
Ranitidine
Amitriptyline
Examples of drugs that target GiPCRs?
Clonidine
Codeine
Sumatriptan
Examples of receptors and drugs that target GqPCRs?
H1 Loratadine
Alpha-1 doxazosin
Angiotensin II Losartan
IP3 promotes an increase in?
Intracellular calcium
What does DAG activate?
Protein kinase C
What does PIP2 do?
Gets cleaved to IP3 and DAG
What does PIP2 stand for?
Phosphatidyl inositol 4, 5 bisphosphate
What does IP3 stand for?
Inositol 1, 4, 5-trisphosphate
What does DAG stand for?
Diacylglycerol
What is receptor desensitization?
Where repeated exposure of the agonist leads to a decreased response
Most common ligand of ligand-gated ion channels?
Neurotransmitters
Examples of ligand-gated ion channel receptors?
GABA receptors
Some 5-HT
NMDA receptors