Parasite Vaccines & Molecular Diagnostics Flashcards

1
Q

3 main classifications of parasites

A

protozoa - microscopic one-celled organisms
helminths - nematodes, trematodes, cestodes
ectoparasites - ticks, fleas, lice, mites

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2
Q

heirloom parasties

A

inerited form primary ancestors

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3
Q

souvenir parasites

A

acquired through contact w animals (migration and agriculture; trravel)

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4
Q

neglected tropical diseases helminth

A

taeniasis/cysticerosis
Guinea worm disease
Echinococcosis
foodborne trematodiases
lymphatic filariasis
soil-transmitted helminthiases
schistosomiasis
onchocerciasis

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5
Q

prozoan neglected tropical diseases

A

Chagas
Leishmaniasis
human adrican trypanosoiasis

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6
Q

extoparasitic neglected tropical diseases

A

scabies
other exctoparasites

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7
Q

NTDs

A
  • not a lot of funding
  • neglected tropical diseases
  • largely preventrable and treatable through efficient delivery of drug treatment, clean drinking water, eradication of vectors, etc.
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8
Q

vaccine against malaria

A

RTSS/AS01
- >/= 5 months
- Plasmodium falciparum
- Abs against circumsporozoite
- protection short-lived; waning immunity
- transmission unchanged; does not target gametocytes (sexual stage) so children will still carry infection to innfect mosquitoes = does not change population transmission

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9
Q

GVAP

A

global vaccine action plan
- prevent mmillionso f deats by 2-2- through more equitale access to existing vaccines for people in all communities
- WHO; enjoy lives free from vaccinep reventable diseases

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10
Q

types of vaccines

A

inactivated : killed version; Hep A, Rabies, flu

live-attenuated: weakened version; MMR

mRNA vaccinesL proteins triggering immune response; COVID-19

subunit, recombinantr, polysaccharide and conjugate vaccines: pieces; S. pneumoniae, Hep B, HPV

toxoid vaccines: toxin iteself; Dip, tetanus

Viral vector vaccines: modified virus to eliver protection; ebola; COVID-19

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11
Q

parasite vaccines

A

no other effective vaccine against human parasitic infections
- parasites = diverse strategies for immune evasion
- must elicit a response that outperforms naturally acquired immunity

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12
Q

what does RTS,S/AS01 target?

A

pre-erythrocytic, blood, and mosquito stages of parasite

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13
Q

Leishmania sp vaccine

A

prophylactic
therapeutic
- currently in development target different species, proteins, strains, etc.

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14
Q

hookworm vaccines

A

phase 1 clinical trials
- 3 different vaccines
- target larval or adult stage

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15
Q

Schistosoma vaccines

A

target different proteins or lifecycle stage

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16
Q

serology

A

antigen detection, Ab detection, hemagglutination, immunofluorescence, etc.

17
Q

molecular-based approaches to diagnose parasitic infections that are faster and more accurate

A

real time PCR, loop-mediated isothermial amplification
sequencing
proteomics

18
Q

why is microscopy still so common today for looking at parasitic infections?

A
  • cost-effective, variety of samples
  • ISSUES: time-consuming, labour intensive, staff with specific expertise
19
Q

when to use serology based assays

A

when direct exam microscopy not possible (chronic phase of infection = no longer presenting symptoms)

similar TAT to microscopy

more sensitive and specific

highest yield:
- microscopy inconclusive
- low parasitemia/asympt
- low egg production/sporadic nature
- monitoring of parasite clearance

20
Q

end point PCR

A

low throughput analysis of 1 target in a single-closed tube
- Leishmania PCR

21
Q

ENDPOINT PCR BENEFITS

A
  • SIGNIFICANT COST SAVINGS
  • MODERATE TATS
  • MODERATE LABOUR INTENSITY
  • INCREASED SENSITIVITY
22
Q

real time PCR

A
  • high throughput analysis of 1+ targets in a single closed tube reaction
  • allows for quantification of original template NAs through various fluorescent chemistry
  • ex: Malaria PCR confirmation
23
Q

benefits of real time PCR

A
  • significant cost savings
  • rapid TAT
  • can witness in real time; no need for elctorphoelectrophoresisresis
  • less labour intensive
  • increased sensitivity
24
Q

Sanger sequenecing

A
  • rapid high throughput sequencing of gnomes to be carried out in single instrument
  • low per nucleotide sequencing cost
  • limited use = research
    > limited databases
    > genome size
  • potential for novel strain typing, molecular epidemiology and antimicrobial resistance
25
whole gneome sequencing
- deep sequencing or massively parallel sequencing - millions of DNA fragments sequenced simultaneously - rapid and high throughput sequencing of genomes on a single instrument; low per nt sequencing cost - not currently used for routine clinical diagnostics of parasites
26
2nd generation sequencing platforms
roche 454 illumina MiSeq
27
3rd generation sequencing platforms
- no PCR step Pac Bio Oxford Nanopore
28
steps in 2nd gen whole genome sequencing
library prep PCR sequencing data analysis
29
proteomics
biomarkers for tissues, cell types, developmental stages and disease states biggest advancement is the introduction of mass-spec platforms - heavily used in mycology and bacteriology - less so in virology and parasitology
30
MALDI-ToF MS
analyzing protein composition to produce unique signature for ID at species level
31
CDC equivalent of Canada
NCRP national reference centre for parasitology
32
NCRP blood born parasite ID techniques
microscopy for all but Toxoplasmosis (but CDC still uses microscopy)
33
current gold std for diagnosing parasite infection
serology and microscopy