Organic Molecules Flashcards

1
Q

Water is a dipole, why does this make it useful as a solvent?

A

Attracted to other positive molecules (ions)
Attracted to other polar molecules (glucose)

These dissolve in water
Chemical reactions take place in solution.

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2
Q

How is water useful as a solvent?

A

Transport Medium

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3
Q

In what reactions is water used as a metabolite?

A

Condensation
Photosynthesis
Hydrolysis

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4
Q

Which is beneficial for water to have a high specific heat capacity?

A

Prevent large fluctuations of water temp
Keeps aquatic habitats stable
Enzymes work efficiently

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5
Q

Why is beneficial for water to have a high latent heat of vaporisation?

A

Temperatur Control

Heat is used to vaporise water for a leafs surface or sweat on the skin.

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6
Q

How does cohesion work in water molecules?

A

H bonds between molecules, many bonds make molecules stick together.
Allows columns of water to be drawn of xylem vessels in plants.

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7
Q

Why is it beneficial for water to have high surface tension?

A

Cohesion between water molecules at surface of pond produces surface tension
Body of an insect is supported.

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8
Q

Why is beneficial for water to have a high density?

A

Provides support and buoyancy for aquatic organisms

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9
Q

Ice is less dense than water, why is this important?

A

Ice floats on water
Ice is a good insulator and prevents large bodies of water losing heat and freezing
Organisms can survive below it.

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10
Q

Water is transparent, why is this important?

A

Light can pass through, aquatic plants can photosynthesise.

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11
Q

Chemical formula for monosaccharides

A

(CH2O)n

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12
Q

Functions of monosaccharides

A
  • source of energy in respiration
  • build larger molecules
  • intermediates in reactions
  • constituents of nucleotides
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13
Q

How is a disaccharide formed?

A

Condensation reaction

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14
Q

How is a glycosidic bond broken?

A

Hydrolysis reaction

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15
Q

What component monosaccharides make up these disaccharides?
Maltose
Sucrose
Lactose

A

Maltose: glucose+ fructose

Sucrose: glucose + fructose

Lactose: glucose+ galactose

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16
Q

How do you test for the presence of sugars?

A

Benedict’s test:

  • equal volumes of benedicts reagent and solution are heated to at least 70
  • reducing sugar= solution turns from blue to brick red precipitate
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17
Q

How do you detect non reducing sugars?

A

Heated with hydrochloride can acid to break down into monosaccharides

Alkaline added( reagents need alkaline to work)

Benedicts reagent added and heated.

18
Q

Why is glucose converted to starch?

A
  • insoluble = no osmotic effect
  • cannot diffuse out of cell
  • compact molecule- can be stored in small spaces
  • carries a lot of energy in bonds
19
Q

What are the two polymers of starch?

A

Amylose

Amylopectin

20
Q

Describe amylose

A
  • linear, unbranched molecule
  • a-1,4 glyscosidic bonds
  • forms a chain that coils into a a-helix
21
Q

Describe amylopectin

A

Chains of glucose monomers with a-1,4 glycosidic bonds

Cross linked with a-1,6 glycosidic bonds and fit inside the amylose.

22
Q

What is the test for the presence of starch?

A

Iodide test:

Iodine solution reacts with starch, resulting in a colour change from orange- brown to blue-black.

23
Q

Describe glycogen

A

Main storage product in animals
Similar to amylopectin:
Shorter a-1,4 linked chains - more branched.

24
Q

Describe structure of cellulose

A

Long parallel chains of b-glucose units
-joined by b-1,4 glycosidic bonds
( links rotate by 180)
H bonds form between parallel chains- stability
60-70 molecules become tightly crossed to form microfibrils
Held in bundles called fibres

25
Describe the structure of chitin
Long chain of b-1,4 linked monomers + groups derived from amino acids = heteropolysaccharide Monomers rotate 180, chains are cross linked by H bonds- forming microfibrils.
26
Describe lipids
- contain carbon, hydrogen and oxygen - non polar compounds- insoluble in water - dissolve in organic substances ( propane, alcohol)
27
How are triglycerides formed?
-1 glycerol and 4 fatty acid molecules -joined by a condensation reaction 3 molecules of water removed Ester bonds formed
28
Properties of saturated lipids
- only single carbon bonds - carbons linked to max number of h bonds - straight zig zag - can align readily- fats are solid - storage in mammals
29
Properties of unsaturated lipids
Chain gets a kinks Cannot align uniformly- lipid does not solidify readily Oils
30
Roles of phospholipids
Biological membranes | Electrical insulation
31
Roles of triglycerides
Energy reserves Thermal insulation Protection - internal organs Metabolic water
32
Describe the test for fats and oils
The emulsion test: - sample mixed with absolute ethanol ( dissolves any lipids present) - shaken with equal volume of water - dissolved lipids come out of solution( insoluble in water) - sample turns cloudy white
33
How do proteins differ from carbohydrates and lipids?
They contain nitrogen
34
How many different amino acids are there?
20
35
How is a peptide bond formed?
Amino group reacts with carboxyl group with the elimination of water.
36
What is primary structure?
Order of the amino acids in the polypeptide chain | Determined by the base sequence of one strand of DNA molecule
37
What is secondary structure?
3D shape polypeptide forms as a result of hydrogen bonding between carboxyl group and amino group a helix spiral shape b pleated sheet
38
What is tertiary structure?
a helix can be folded to give a complex, compact 3D structure Shape maintained by h bonds, ionic bonds, disulphides bonds, hydrophobic interactions.
39
What is quaternary structure?
Combine with another polypeptide chain | E.g. Insulin molecule has 2 chains
40
Describe fibrous proteins
-long thin molecules -insoluble in water (bone) -parallel chain and sheets with cross linkages -strong and tough E.g. Collagen in tendons -single fibre ( tropocollagen) consists of 3 identical chains twisted around each other Chains linked by h bonds- stability
41
Describe globular proteins
- spherical molecules -soluble in water ( enzymes, antibodies, plasma proteins, hormones) E.g. Haemoglobin: 4 folded polypeptide chains Centre of each is haem, an iron containing group
42
What is the test for proteins?
The biuret test: - Biuret reagent added( sodium hydroxide and copper sulphate) - react to make blue copper hydroxide - interacts with peptide bonds- make biuret- purple