Nucleicacid Dna Flashcards

1
Q

Replication

A

DNA synthesis by copying of existing DNA

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2
Q

Transcription

A

RNA synthesis by copying of DNA

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3
Q

RNA processing

A

Modification of RNA in the nucleus

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4
Q

Translation

A

Protein synthesis by decoding of RNA

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5
Q

Nucleic acid are composed of what

A

Monomeric units made up of an ‘information coding’ nitrogen base (purines and pyrimidines)
Adenine, Guanine
Thymine, Cytosine, Uracil

A sugar scaffold to hold the bases
Ribose in RNA
Deoxyribose in DNA

A phosphate connector

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6
Q

five principal bases in nucleic acids

A

A, G, T, C are present in DNA

A, G, U, C are present in RNA

Each have H bond donors and acceptors

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7
Q

The sugar forms the backbone on the outside of the molecule and has anti-parallel 5’ to 3’ directionality

A
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8
Q

DNA properties

A

Native DNA is a double helix of complementary antiparallel chains

Hydrogen bonding between complementary base pairs (A-T or G-C) holds the two strands together

As the nucleotides stack, phosphodiester bonds between the phosphates above and below create the strand backbone

DNA helix is right handed (B, A, and Z forms exist, but B is the common form)

The two strands are slightly asymmetrically aligned, which results in the major and minor grooves along the double helix structure

The grooves enable factors to interact with the bases during DNA replication and transcription

The unit of length of DNA is the base pair (bp) and there are around 3 billion bp in the human genome and around 20,000-25,000 genes

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9
Q

Eukaryotic DNA

A

packaged into chromatin (forms 23 pairs of individual chromosomes)

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10
Q

What is the nucleo some

A

The basic building unit of chromatin is the nucleosome

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11
Q

Nucleosome are composed of what

A

8 highly basic protein called histone

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12
Q

Dna

A

‘DNA is wound around the nucleosome with spacing between nucleosomes
DNA follows a hierarchical pathway of folding to form the chromosome. The centromere is a constricted region of the chromosome involved in segregation of chromosomes to daughter cells during DNA replication and cell division
Ends of chromosomes have a highly repetitive G-C rich sequence called the telomere - this non-coding region helps protect the structure of chromosome. Telomeres shorten with successive replications and eventually prevent further replication causing cellular senescence

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13
Q

Nucleoside role

A

regulation of gene expression, or activity, by determining whether the DNA sequences can be accessed by transcription factors (gene expression)

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14
Q

Enzymatic modification of theamino-terminaltails of histones (e.g. acetylation, methylation, or phosphorylation) modifies the electrical charge and shape

These modifications are physiologically reversible and may prepare the chromatin for DNA replication and transcription

A
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15
Q

Ribose nuclei’s acid (RNA)

A

Like DNA is composed of nucleotides, but differs from DNA;
Uracil, adenine and guanine and cytosine
Polymer joined by 3’ to 5’ phosphodiester bonds, but usually single stranded
Can form secondary and tertiary structuters by folding and base-pairing with itself
Some RNAs are capable of catalyzing reactions e.g. peptidyl transferase (involved in translation)

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16
Q

Messenger RNA (mRNA)

A

Carries genetic information from DNA to the cytoplasm for translation into proteins

17
Q

Transfer RNA((tRNA)

A

Has a ‘cloverleaf’ secondary structure and carries individual amino acids for assembly into proteins
Inosine, which is nucleoside modified from adenine is important in tRNA function

18
Q

Ribosomal RNA (rRNA)

A

Several rRNAs (5S, 5.8S, 18S, 28S) and accounts for the majority of total RNA in a cell

19
Q

Intracellular communication:

A

Cyclic adenosine monophosphate (cAMP) and guanosine monophosphate (cGMP) are intracellular common chemical signalling molecules.

20
Q

Energy

A

Adenosine triphosphate (ATP) is a key energy currency of the cell. Guanosine triphosphate (GTP) is also as an energy source in many cellular activities
Energy is stored in the covalent bonds which link the three phosphates

21
Q

differences between RNA and DNA

A

Nucleotides in DNA have a 2’ deoxyribose sugar, while nucleotides in RNA have a ribose sugar

RNA has uridine (base: uracil) instead of deoxythymidine (base:thymine) phosphate residues

DNA is usually a double helix, usually in the B form, while RNA is usually single stranded,

Single stranded RNA can fold into diverse structures through regions of internal base pairing and perform similar functions to proteins, including catalysis

Several types of RNA e.g. messenger RNA (transcription), transfer RNA (translation), ribosomal RNA (ribosomes/translation) and others