Nucleic Acid Chemistry Flashcards

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1
Q

What are the two types of nucleic acids?

A

DNA and RNA

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2
Q

What are DNA and RNA made out of?

A

They are polymers made out of nucleotide monomers

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3
Q

What does DNA stand for?

A

Deoxyribonucleic acid

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4
Q

What does RNA stand for?

A

Ribonucleic acid

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5
Q

What is a nucleotide?

A

Nucleotides form the basic structural unit of nucleic acids

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6
Q

What do nucleotides consist of?

A

A sugar, a base, and a phosphate group(s). They are covalently bonded to each other.

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7
Q

What are the two types of sugars in nucleotides?

A

Deoxyribose and ribose

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8
Q

What is the structure of the sugars?

A

They are five-carbon sugars. Four carbons and oxygen are linked to form a ring structure.

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9
Q

How are the carbons named on the sugar?

A

1’
2’
3’
4’
5’
(remember which carbon is which)

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10
Q

What is the difference between ribose and deoxyribose?

A

In the 2’ carbon, ribose contains a hydroxyl group while deoxyribose only has H (no oxygen)

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11
Q

What are the similarities between ribose and deoxyribose?

A

The 1’ carbon is used to link to a nitrogenous base
The 3’ carbon is important for linking nucleotides together to form nucleic acids

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12
Q

What is a nucleotide containing ribose called?

A

Ribonucleotide

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13
Q

What is a nucleotide containing deoxyribose called?

A

Deoxyribonucleotide

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14
Q

What are nitrogenous bases?

A

hm

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15
Q

How many bases are found in nucleotides?

A

There are 5 different bases

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16
Q

What are pyrimidines?

A

A base structure containing one six-sided ring.
I don’t think remembering the atom order is important..,.,. but idk
Cytosine, thymine, and uracil are pyrimidines

17
Q

What are purines?

A

A base structure containing two rings.
Adenine and guanine are purines

18
Q

Which base is only found in DNA?

A

Thymine

19
Q

Which base is only found in RNA?

A

Uracil

20
Q

How many phosphates groups can nucleotides have?

A

1-3 phosphate groups

21
Q

What does MP mean?

A

Monophosphate; one phosphate group

22
Q

What does DP mean?

A

Diphosphate; two phosphate groups

23
Q

What does TP mean?

A

Triphosphate; three phosphate groups

24
Q

How are nucleotides named?

A

Nucleoside + phosphate name

25
Q

What is a nucleoside?

A

A sugar linked to a base

26
Q

What are the four nucleosides associated with deoxyribose?

A

Deoxyadenosine (dA)
Deoxyguanosine (dG)
Deoxycytidine (dC)
Deoxythymidine (dT)

27
Q

What are the four nucleosides associated with ribose?

A

Adenosine (A)
Guanosine (G)
Cytidine (C)
Uridine (U)

28
Q

What is the bond the links nucleotides together?

A

Phosphodiester bonds

29
Q

How is a phosphodiester bond formed?

A

A dehydration reaction

30
Q

Where is the phosphodiester bond formed to link nucleotides?

A

It is formed between the phosphate group of one nucleotide and the hydroxyl group on the 3’ carbon of another nucleotide.

31
Q

What is a strand?

A

A chain of nucleotides linked by phosphodiester bonds

32
Q

What forms the backbone of a strand?

A

The linked sugars and phosphate groups form the backbone of a strand

33
Q

How many strands does DNA have?

A

Two strands
Double-stranded

34
Q

How many strands does RNA have?

A

One strand
Single-stranded

35
Q

What are the two ends of a strand called?

A

5’ end
3’ end

36
Q

What does the 5’ end of a strand contain?

A

A free phosphate group

37
Q

What does the 3’ end of a strand contain?

A

A free hydroxyl group