n metabolism Flashcards

1
Q

What is nitrogen fixation?

A

The process of converting atmospheric nitrogen (N₂) into ammonia (NH₃) or ammonium (NH₄⁺), which can be incorporated into organic molecules like amino acids.

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2
Q

Why is nitrogen fixation biochemically challenging?

A

Nitrogen (N₂) has a very strong triple bond (N≡N), making it inert and difficult to break, requiring high energy to fix it into usable forms for organisms.

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3
Q

What are the primary natural sources of nitrogen fixation?

A

Microorganisms (67%), lightning (10%), and industrial processes (23%).

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4
Q

How is nitrogen fixed in microorganisms?

A

By nitrogenase, an enzyme complex that reduces N₂ to NH₄⁺ using electrons from reduced ferredoxin and ATP.

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5
Q

What are root nodules, and how are they involved in nitrogen fixation?

A

Root nodules are structures in legume plants where nitrogen-fixing bacteria live symbiotically, fixing nitrogen and providing NH₄⁺ to the plant in exchange for carbohydrates.

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6
Q

What is the Haber process?

A

An industrial process for fixing nitrogen, where N₂ is combined with hydrogen (H₂) under high pressure and temperature to produce ammonia (NH₃).

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7
Q

How is nitrogen incorporated into amino acids in plants and microorganisms?

A

Plants and microorganisms reduce nitrate (NO₃⁻) to NH₄⁺ via nitrate reductase and nitrite reductase enzymes.

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8
Q

What is the role of glutamate in nitrogen assimilation?

A

Glutamate is synthesized from NH₄⁺ and α-ketoglutarate via glutamate dehydrogenase and is a key precursor for the synthesis of other amino acids.

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9
Q

What enzyme is involved in the conversion of NH₄⁺ to glutamate?

A

Glutamate dehydrogenase.

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10
Q

What is transamination?

A

The transfer of an amino group (–NH₂) from glutamate to α-keto acids to form other amino acids, a crucial process in amino acid metabolism.

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11
Q

What is the primary nitrogen donor for most amino acids?

A

Glutamate is the main nitrogen donor for other amino acids via transamination.

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12
Q

What are some examples of amino acids that are derived from glutamate?

A

Glutamine, proline, and arginine.

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13
Q

How does nitrogen fixation in microorganisms differ from industrial nitrogen fixation?

A

Microorganisms use the nitrogenase enzyme and ATP to reduce N₂ to NH₄⁺ in an energy-intensive, anaerobic process, while industrial nitrogen fixation (Haber process) uses high pressure, temperature, and an iron catalyst to produce ammonia.

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14
Q

What is the role of leghaemoglobin in nitrogen-fixing plants?

A

Leghaemoglobin maintains anaerobic conditions in root nodules, protecting the nitrogenase enzyme from oxygen, which would inhibit its function.

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15
Q

What role does the citric acid cycle (TCA cycle) play in amino acid biosynthesis?

A

The intermediates of the citric acid cycle, such as α-ketoglutarate and oxaloacetate, are key precursors in the synthesis of amino acids like glutamate, aspartate, and others.

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16
Q

How is nitrogen utilized in protein metabolism?

A

Nitrogen is incorporated into amino acids, which are then used to synthesize proteins in animals, playing a crucial role in cellular functions.

17
Q

What are the main steps in amino acid biosynthesis?

A

The incorporation of ammonia (NH₄⁺) into amino acids involves initial steps by enzymes like glutamate dehydrogenase and glutamine synthetase, followed by transamination and other modifications to form various amino acids.

18
Q

What are the major metabolic precursors for amino acids in bacteria and plants?

A

The major metabolic precursors include intermediates from glycolysis and the citric acid cycle, such as 3-phosphoglycerate, pyruvate, α-ketoglutarate, and oxaloacetate.

19
Q

Which enzyme is responsible for the incorporation of NH₄⁺ into glutamine?

A

Glutamine synthetase.

20
Q

What are some examples of essential amino acids that must be obtained from the diet?

A

Examples include leucine, valine, lysine, and tryptophan.

21
Q

What is the role of cofactors in amino acid biosynthesis?

A

Cofactors like ATP, NADPH, and vitamins play essential roles in the enzymes involved in amino acid biosynthesis, supporting reactions like transamination and reductive processes

22
Q

What are feedback inhibitors in amino acid biosynthesis?

A

Feedback inhibitors are molecules, often the end products of biosynthetic pathways, that inhibit enzymes in the pathway to regulate the amount of amino acid being produced.

23
Q

What is the importance of nitrogen fixation in the global nitrogen cycle?

A

Nitrogen fixation is a key process in the nitrogen cycle, as it converts inert atmospheric nitrogen into a form (NH₄⁺) that can be utilized by plants and microorganisms for growth.

24
Q

How does the nitrogen cycle impact agricultural practices?

A

Nitrogen fixation, through both natural (microbial) and industrial processes, provides essential nitrogen compounds (like ammonium and nitrates) used in fertilizers to support crop growth.

25
Q

Why is nitrogen fixation important for feeding the world’s population?

A

Nitrogen fixation is crucial for producing ammonia, which is then used to make fertilizers. Fertilizers are essential for growing crops and feeding a large portion of the global population.