bioenergetics Flashcards

1
Q

What is the primary function of ATP in cells?

A

ATP acts as the primary energy currency in cells, storing and transferring energy to drive various cellular processes.

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2
Q

What is the free energy change (ΔG) for the hydrolysis of ATP?

A

The free energy change (ΔG) for the hydrolysis of ATP to ADP and inorganic phosphate (Pi) is approximately -31 kJ/mol.

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3
Q

What are two factors that contribute to the large free energy change during ATP hydrolysis?

A

Relief of electrostatic repulsion between the negatively charged phosphate groups.
Increased resonance stabilization of the products (ADP and Pi).

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4
Q

How does energy coupling work in metabolism?

A

Energy coupling involves using the energy released from exergonic reactions (e.g., ATP hydrolysis) to drive endergonic reactions (e.g., protein synthesis).

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4
Q

How many ATP/GTP molecules are theoretically required to form one peptide bond during protein synthesis?

A

Theoretically, 3 ATP/GTP molecules are used for each peptide bond formed.

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5
Q

Why is the actual ATP requirement for protein synthesis in whole animals ten times higher than theoretical values?

A

ATP is consumed in various other processes such as cellular maintenance, amino acid synthesis, active transport of nutrients, and protein turnover.

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6
Q

What is the relationship between the oxidation of foodstuffs and ATP formation?

A

The oxidation of foodstuffs (e.g., glucose) releases energy, which can be coupled to ATP formation to store and transfer energy for cellular processes.

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7
Q

What is the standard free energy change (ΔG°) for the complete oxidation of glucose to CO₂ and H₂O?

A

The standard free energy change (ΔG°) for the oxidation of glucose is approximately -2870 kJ/mol.

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8
Q

What role do redox reactions play in ATP generation?

A

Redox reactions transfer electrons between molecules, and the energy released from these reactions is used to generate ATP, especially in the electron transport chain.

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9
Q

What is the Nernst equation used for?

A

The Nernst equation calculates the actual redox potential (E) of a reaction based on the concentrations of oxidized and reduced species.

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10
Q

What is the formula for calculating free energy from the redox potential?

A

ΔG° = -nFΔE°
(where n = number of electrons transferred, F = Faraday constant, ΔE° = redox potential difference between two couples)

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11
Q

How does the electron transport chain (ETC) generate ATP?

A

The ETC transfers electrons from NADH and FADH₂ to oxygen, releasing energy that is used to pump protons across the mitochondrial membrane, creating a proton gradient that drives ATP synthesis.

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12
Q

What is the typical free energy change when NADH is oxidized in the ETC?

A

The free energy change when NADH is oxidized is approximately -220 kJ/mol.

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13
Q

Why is energy “wasted” in the electron transport chain?

A

Some energy is lost in the ETC to ensure the reaction proceeds in one direction, making the process irreversible, which is necessary for efficient ATP production.

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14
Q

What is the difference between equilibrium and non-equilibrium thermodynamics?

A

What is the difference between equilibrium and non-equilibrium thermodynamics?

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15
Q

How are enthalpy, entropy, and free energy related?

A

The relationship is described by the equation:
ΔG° = ΔH° - TΔS°
(where ΔG° = change in free energy, ΔH° = change in enthalpy, T = temperature, ΔS° = change in entropy)

16
Q

What is the significance of ATP as an energy “currency” in cells?

A

ATP serves as the middleman in energy transfer, storing energy from oxidation reactions and delivering it to drive cellular functions like protein synthesis, muscle contraction, and active transport.

17
Q

What is the role of NAD⁺ and NADH in cellular metabolism?

A

NAD⁺ acts as an electron carrier, being reduced to NADH during oxidation reactions, and NADH then donates electrons to the electron transport chain for ATP production.

18
Q

What does the “Energy Charge” of a cell refer to?

A

he energy charge refers to the ratio of ATP to ADP and AMP in a cell, reflecting the energy status of the cell. A higher ratio indicates a higher energy state.

19
Q

How is energy flow in an open system like a living cell different from a closed system?

A

In an open system, energy and matter flow through continuously, whereas in a closed system, energy eventually reaches equilibrium, and no exchange with the environment occurs.