Mycology Lecture 2 Flashcards
Most common fungal species to cause disease
Opportunistic invasive mycoses (esp. in immunocompromised patients)
Examples of opportunistic invasive mycoses
Aspergillosis, Candidiasis, Cryptococcosis, Mucormycosis, Pneumocystis
True or false: Endemic dimorphic mycoses have higher mortality rates than opportunistic invasive mycoses
False - OIM has much higher mortality rates
Normal human fungal microbiota is usually characterized as:
commensalism
Many fungi live as commensals with humans, including species such as:
Candida; Malassezia; Pneumocystis jiroveci
Candida as a normal human commensal is usually found in the ____ ___
gastrointestinal tract
Malassezia species as normal human commensals are usually found:
on the outermost layer of skin
Pneumocystis jiroceci as a normal human commensal is usually found in the _____ ___
respiratory tract
Infection (clinical sense)
fungus or immune response to fungus causes damage to host tissue
True or false: humans generally are needed for the completion of fungal life cycle
False - infections are often accidental encounters
True or false: person to person/animal to person transmission of mycoses are rare
True
What are some common themes for causing fungal diseases? (4)
- exposure
- portals of entry (damage to barriers)
- immunocompromised state of host
- fungal thermotolerance/other fungal attributes that can help them evade immune system and survive in the body
True or false: fungi grow very quickly
False - may not grow quickly
True or false: fungi may not move fast in infections
True (ex: fungal meningitis may take weeks to months to be diagnosed and to kill host)
True or false: if fungi do not grow quickly in disease, it can be hard to treat and may require life-long treatments
True
True or false: “epidemics” of mycoses are sometimes reported
True
Where do fungal infections come from?
environmental source (yeast or mold) transfers to human host through inhalation, ingestion, traumatic inoculation
Traumatic inoculation
major disruption of the skin, like through horrible wounds/bone exposed and open to the environment
Once a fungal infection has been established, it can spread through:
dissemination to other organs or via blood (hematogenous)
Portals of entry for fungal infections:
- skin
- inhalation (nasal passages, lungs, sinuses)
- mucous membranes (GI and GU tracts, eye)
- iatrogenic (catheters)
What are the three infection classification schemes?
- invasiveness (superficial, subcutaneous, or deep?)
- source of fungi (endogenous or exogenous?)
- morphology (yeast/mold/both?)
Name 6 examples of primary pathogens
- Histoplasma
- Coccidioides
- Blastomyces
- Sporothrix
- Paracoccidiodes
- Cryptococcus (which is also opportunistic!!)
Key risk factor for a primary pathogen
Exposure
Key risk factor for an opportunistic pathogen
Host and/or host response
True or false: some fungi may produce an allergenic disease
True - body recognizes fungus as an allergen; allergic bronchopulmonary aspergillosis (ABPA)
Mycotoxicosis
another fungal condition marked by specific toxin production
Aspergillus flavus produces a toxin called ____, which is found in and implicated in:
Aflatoxin; found in stored grains, corn, peanuts; implicated in liver cancer
True or false: ergotism is another fungal condition marked by toxin production and causes Saint Anthony’s Fire
True
Why have there been enormous increases in fungal infections?
- we’ve gotten better at diagnosing
2. (more importantly) large increase in at-risk population and in exposed population
Examples of increased at-risk and exposed populations for mycoses
- HIV/AIDS pandemic
- advances in medical technology (in particular, medical devices and catheters)
- climate/habitat change
- Urbanization/population growth
True or false: specific immunodeficiencies will put you at risk for specific fungal infections
True
Defects in cellular immunity (T cells) is caused by:
HIV/AIDS; solid organ transplant; medications (etc.)
Infections associated with T cell deficiencies:
most fungi, including: Candida, Pneumocystis, Cryptococcus, all endemic mycoses, (Aspergillus less common)
Defects in neutrophil number or function caused by:
chemotherapy, bone/stem cell transplants**, medications, etc.
Infections associated with defects in neutrophil number or function:
Candida, Aspergillus (common), Zygomycetes, several other molds
Methods of lab diagnosis of mycoses
histology and direct examination, culture, serology, antigen testing, PCR
Stains used for histology/direct examination
GMS “silver stain” and Periodic acid-Schiff (PAS)
other: KOH prep, Calcofluor white to stain chitin
GMS targets ____ of most fungi. GMS typically stains:
carbohydrates; black/brown on light green background
PAS stain targets _____ of most fungi. Examples include:
polysaccharides; glycogen and glycoproteins
PAS stain color
red-pink-purple
Culture usually consists of _____ ____ to prevent ____ ____
selective media; bacterial growth
Serology tests for ____ ____
antibody response (IgM or IgG specifically)
Antigen testing tests for ____ ___. Some examples include:
fungal parts (i.e. actual fungal antigens); Aspergillus galactomannan, Cryptococcal antigen, Histoplasma antigen
Direct exam pros
you can see the actual pathologic effect
Direct exam cons
- not sensitive
- difficult to identify species based on appearance alone
- can’t do susceptibility testing
Culture pros
Specific; can do susceptibility testing
Culture cons
Sensitivity; time
Antigen testing pros
generally faster
Antigen testing varies in ____ and ____
sensitivity and specificity
Antigen testing cons
No susceptibility testing
PCR pros
specific