module 3 Flashcards
Amino Acids
Building blocks of Proteins
Classes of Amino Acids
Non - Polar Aliphatic
Aromatic
Polar, Uncharged
Polar Positively Charges
Polar, Negatively Charged
Non Polar Aliphatic Amino Acids
Mainly Hydrocarbon side chains
Residues with non polar chains are often buries in the core of the protein
Proline
Often found at polypeptide turns
Glycine
Smallest amino acid and is the only one that is not chiral
Methionine
one of 2 amino acids with sulfur group within its side chain
Histidine
Can also be considered as an aromatic
Tyrosine
Can be post tralation modifies through Phosphorylation
Phosphorylation
Mechanism to regulate protein function
Serine and Threonine
Acids with hydroxyl groups can be phosphorylates
What causes a disulphide bond
two cysteines
Disulfide bonds
Disulfides stabilize protein structures
Cysteine residues form these bonds
Can be inter molecular or intramolecular
Positively Charged Amino Acids
+1 Charge
Lys and Arg
Always carry +1 met charge at physiological pH
Histidine
Imaidazole group has a pKA near physiological pH such that a fraction of cellular histidines will be +1 and the the rest will carry a net charge of 0