module 1 Flashcards
oxygen containing functional groups
hydroxyl - ROH
carbonyl - R-C=O
carboxyl - R-COOH
ester - like a carboxyl but R group is connected to oxygen
sulfur functional groups
thiol - R-S-H
disulfide - R-S-S-R
thioester - similar to disulfide but C=O replaces S
nitrogen functional groups
amino - three H bonds connected to N and one R
amide -formed from reaction of amine and carboxylic acid
phosphorous functional groups
phosphate - P connected to three O atoms and one OH
phosphoesters - results from addition of phosphate group to OH group
phosphanhydrides - found in ATP, have large free energy of hydrolysis, formed by multiple phosphate groups
enol
tautomer of carbonyl groups
relative strength of attractive forces
weakest to strongest
LDF, dipole dipole, H-bond, Ion dipole, Ionic attractions
what accepts a hydrogen bond
lone pair of electronegative atoms
solubility -
tendency of a substance to dissolve in another substance that has similar polarity and participates in same types of attractive forces
Ka/ pKA relationship
low K = high pka
buffer function
resists changes in pH, contains a weak acid or weak base with its conjugate base or acid
buffering capacity vs buffering range
buffering capacity - amount of acid or base a buffer can neutralize
buffering range - pH range a buffer can neutralize
optimal pH is when HA = A- (ph = pKa)
favorable criteria for selecting a buffer:
suitable pKa, suitable ionic strength, no interference with RXN/assay, no precipitation due to presence of buffer
principal buffer in cells:
H2PO4/HPO42-
principal buffer In blood
H2CO3/ HCO3-
respiratory acidosis
hypoventilation results in not enough CO2 being expelled, causing equilibirum to shift right and produce more H3O and lower pH