Model Organisms For Genetic Analysis Flashcards

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1
Q

Define a model organism

A

Well established biological system used to help understand biology and disease

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2
Q

what are the main characteristics of a model organism

A
Rapid development/maturity 
Ability to transform 
Large number of mutants 
Large offspring number 
Fast cell cycle 
Sequenced genome
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3
Q

Why are large number of offspring advantage in model organisms

A

Can do big generic crosses

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4
Q

What are the 5 model organism used

A

Worm, zebra fly , budding/fission yeast , mouse

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5
Q

Which model organism is a unicellular eukaryote with linear chromosomes

A

Yeast

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6
Q

What makes budding yeast and fission yeast a model organism

A
Rapid and simple growth eg on agar
Large scale genetic crosses available 
Gene knockouts are constructed easily 
Can be transformed with plasmids 
Large number of mutants eg gfp
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7
Q

What properties do yeast have similar to humans

A

Cell division cycle
Gene expression
Dna replication

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8
Q

What are yeast transformable in

A

Plasmids

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9
Q

How are budding and fission yeast different

A

Evolutionary divergent. Some genes are not present in budding but are in fission

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10
Q

Which model organism is more useful than yeast only due to the fact it’s multicellular

A

Fruit flies

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11
Q

Explain why fruit flies are good model organisms

A
Large number of mutants 
Large number of eggs laid in a day
Large number can be maintained (small) 
Can create knockdowns 
Can create deletion/insertion mutations
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12
Q

How are fruit flies transformed

A

By transporons - genes/dna that can move location on a genome

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13
Q

What are the 3 bigger contributions coming from fruit flies

A

Cell signalling pathways of oncogenes were identified (cancer)

Embryo development insights via analysis of fly development

Neurological disease model- gave insight to human conditions eg SMA and Alzheimer’s
(Eg flies that had mutant SNM gene had phenotypes of SMA disease)

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14
Q

What is a disease model

A

Mutant organism that mimics features of human disease (eg an orthologue gene which was mutant)

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15
Q

What is the main thing worms are used for in genetic experiments

A

Studying ageing and development- their life cycle is very short and each cell can be monitored via development

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16
Q

Other than short life span of worms what else makes it a model organism

A

Many mutants available
2 sexes allows big genetic crosses
Large number of offspring

Gene knockdowns via siRna

17
Q

Explain how gene knockdowns are induced in worms

A

Bacteria with double strand RNA is ingested by the worm

This produces siRNA

SiRNA Then prevents gene expression (targets specific genes)

18
Q

What was produced due to model organism worm

A

First extension to life span mutant

19
Q

Give some ways zebra fish are model organisms

A

Lay many eggs
Sexually mature quick
Embryos can be developed externally and are transparent

20
Q

How can mutations be induced in zebra fish

A

random mutagenesis

21
Q

How are knockdowns induced in zebra fish

A

Using morpholinos -

Nucleotide oligomers that block expression

22
Q

What are zebra fish good models for

A

Vertebrate development
Diseases like cancer
Drug discovery

23
Q

What is the model organism closest related to humans (many orthologue genes)

A

Mouse - mammalian model

24
Q

Why are mice used as model organisms

A

Short breeding cycle
Can inbreed to get offspring with same genes
Can produce transgenic mice

25
Q

Explain the way to produce transgenic mice with knockouts

A

Embryonic stem cells with knockout genes inserted into embryo of mouse

Mouse develops and reproduces hybrid mice

After many many breeds, a KO MOUSE IS PRODUCED WITH KNOCKOUTS

26
Q

Why is it a disadvantage to use transgenic mice to produce knockouts to study disease

A

Takes too long and is expensive

27
Q

How was a mutant mouse used to study diabetes / obesity

A

The ob ob mouse with no leptin gene (appetite control) became obese and developed symptoms of diabetes = leptin is linked

28
Q

What other diseases apart from diabetes and leptin gene have been indetified due to KO mice

A

Cystic fibrosis- the mouse have CFTR gene knockout

Cancer