missed during blurts Flashcards

1
Q

what can fimbriae also be called

A

adhesins or adhesion pili

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2
Q

what can pili also be called

A

sex pili or F pilus

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3
Q

two roles of capsules

A

Prevent cell from drying out and virulence factors

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4
Q

describe lag phase

A

length depends on history of the inoculum, time is required to get biosynthetic reactions
running

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5
Q

whats an auxotroph

A

Auxotroph= an organism that is unable to synthesize one or more essential growth
factors, and it will not grow unless factor is provided

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6
Q

what things may auxotrophs lack

A

98% of all the microorganisms
sequenced so far lack essential
pathways or key genes for the
synthesis of amino acids

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7
Q

whats an autotroph

A

Autotrophs, take CO2 and fix It into organic carbon. Self sustaioning. Primary producers, these are self sufficient

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8
Q

what organisms are the primary producers

A

the autotrophs

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9
Q

whats a heterotroph

A

Heterotrophs: take the organic carbon and fix it into CO2

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10
Q

whats a chemotroph

A

Chemotroph: chemical, organic or inorganic molecules used for enegry.

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11
Q

whats a phototroph

A

Phototroph: light to make energy

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12
Q

examples of chemotrophs and the different ways it can be done

A

Humans eat organic carbon molecules but some bacteria can use H2S which is inorganic.

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13
Q

define microbial ecology

A

The study of the relationships and interactions within microbial communities

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14
Q

Mycoplasmas

A

Prokaryotes that lack Cell Walls

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15
Q

describe the plasmid

A

a small circular self replicating DNA molecule separate from the main chromosome

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16
Q

describe wild type strain of bacteria

A

has all essential genes, can grow by itself, can be cultured

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17
Q

describe auxotrophs

A

lacks or is deffective in one or more essential genes for growth factors, cant grow unless the missing factor is supplied

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18
Q

define syntrophy

A

syntrophy, is when one species
gains metabolic products of another species.

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19
Q

microbial ecology

A

the study of interrelations among organisms and the environment

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20
Q

microbiome

A

all microorganisms and their genes within an environment.

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21
Q

Mesocosm

A

experimental conditions that simulates the real environment

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22
Q

enrichment culture

A

providing the temperature and
chemical conditions in the laboratory that encourage
the growth of specific groups of microbes

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23
Q

4 phyla that dominate our microbiome

A

Firmicutes
v Bacteroidetes
v Actinobacteria
v Proteobacteria

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24
Q

whats a viral envelope made of

A

lipids

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25
describe icosahedral
a 20 faced polyhedron, the faces being equalateral triangles.
26
what in the cell do viruses hijack
biosynthetic machinery
27
what makes the viral capsid
globular protein units called capsomeres
28
most efficient way to pack the capsomere proteins
in a icosahedral arrangement
29
whats positive sense RNA virus
that positive sense acts like mRNA, so their genome can be directly translated into proteins.
30
whats negative sense RNA virus
Negative sense RNA viruses have to have their genome transcribed to then be translated then make the protein
31
steps of virus replication in human cells
1: the virus attaches to our cells through a receptor on the cell membrane 2: it the penetrates the cell membrane 3:the genome is uncoated 4: the genome is then replicated and expressed into proteins 5: the proteins are then assembled 6: the now formed virus is now released from the cell.
32
what on the cell does covid bind to
ACE2 receptor
33
what did chargaff discover
large variation in DNA and that AT CG
34
whats 8 histone proteins together called
an optima
35
whats a nucleosome
an optima plus the DNA wound around it 1.67 times
36
what makes a nuclear pore complex
nucleoporin proteins
37
what does the intermediate filaments help
help dna packing within the nucleus
38
whats the bit with lots of chromatin called in the nucleus
the nucleolus
39
what do electrons go to after PS1
NADP+ reductase
40
steps of calvin cycle
fixation, reduction and regeneration
41
what surrounds the pinocytosis vesicle
coat proteins
42
what do microfilaments do underneath the plasma membrane
make the membrane less fluid
43
collagen is the most abundant
glycoprotein
44
steps of PCR
denaturation, annealing then extension
45
temperature of denaturation
94-98
46
temperature of annealing
45-70
47
temperature of extension
72 exactly
48
what does en vitro mean
in a test tube
49
where are origins of replication
in ATATAT rich regions, only 2 H bonds
50
what is error correction during DNA synthesis done by
EXOnuclease activity of DNA pol 3
51
what is error correction done by after DNA synthesis
endonuclease
52
two reasons of En Vitro DNA syn
In vitro method of making multiple DNA copies so that there is enough DNA material to work with v Only ‘targeted’ DNA region will be copied
53
in a karyotype the chromosomes are in what state
a metaphase chromosome
54
why do most gene products of X mutations not show a mosaic effect
Most do not show a mosaic effect in carrier females because the gene products can move around the body.
55
what does 5' G cap do
Prevents mRNA degradation, promote intron excision and provides a binding site for the small ribosomal subunit
56
what activates termination in the translation
a release factor
57
mendels first lawe
segregation
58
mendels second law
independant assortment
59
whtas genetic screening
Increase the rate of random mutation, select for a phenotype of interest and sequence the genome to identify the mutation
60
whats the cell called when it has a trophectoderm
blastocyst