Midterm 2 Lecture Slides Flashcards
Energy flows into an ecosystem as _____ and leaves as ____.
sunlight…heat
___ drives cellular work
ATP
About _____% of food ends up as ATP
30-35%
The energy stored in organic molecules of food ultimately comes from ____
the sun
Why do organic compounds possess potential energy?
the arrangement of electrons in the bonds
Aerobic respiration
harvests chemical energy in presence of O2
General Example Reaction
glucose+oxygen -> carbon dioxide + energy (ATP+heat)
Fermentation
a partial degradation of sugars that occurs without O2
Anaerobic respiration
similar to aerobic respiration, use substances other than O2 as an electron acceptor (like sulfate)
What releases energy stored in organic molecules?
the transfer of electrons
redox reactions
chemical reactions that transfer electrons between reactants
Oxidation
a substance loses electrons (oxidized)
Reduction
a substance gains electrons (reduced)
T/F: All redox reactions transfer electrons.
FALSE: Some just change the electron sharing in covalent bonds (closer to electronegative atom)
cellular respiration
the fuel (such as glucose) is oxidized and O2 is reduced
Electrons from organiz compounds are usually first transferred to _____
NAD+
NAD+ carries…
…high energy electrons and H
NADH passes the electrons to the _____
electron transport chain
The Stages of Cellular Respiration
1) glycolysis 2) the citric acid cycle 3) oxidative phosphorylation
Glycolysis
“sugar splitting” (into two molecules of pyruvate) / occurs in the cytoplasm in 2 phases : Energy investment and Energy payoff / produces 2 ATP and 2 NADH
Does glycolysis occur without O2?
Yes, it can occur whether or not O2 is present.
Oxidation of Pyruvate to Acetyl CoA
In the presence of O2, pyruvate can enter the mitochondrion (in euk cells) -> must be converted to acetyl CoA before Citric Acid Cycle / CO2 is releases and 1 molecule of NADH is formed for each pyruvate
The citric acid cycle (Krebs Cycle)
completes the breakdown of glucose and pyruvate to CO2 / generates: 1 ATP, 3 NADH, and 1 FADH2 per turn / acetyl joins cycle by combining with oxaloacetate (forms citrate) / 7 steps to decompose citrate back to oxaloacetate
In the Krebs Cycle, which products relay electrons extracted from food to the electron transport chain?
In the Krebs cycle, 3 NADH and 1 FADH2 do this
How many ATP molecules are generated by glycolysis and the citric acid cycle together?
4 ATP by substrate-level phosphorylation
What are the electrons being carried by NADH and FADH2 going to be used for?
to generate an electrochemical/concentration gradient
Oxidative phosphorylation
accounts for most of ATP synthesis / 2 electron carriers NADH and FADH2 donate electrons to the electron transport chain to power OP / in the cristae of the mitochondrion / mostly proteins in multiprotein complexes
In oxidative phosphorylation, how many proteins are in the chain?
I, II, III, IV (so 4)
How does redox play a role in the electron transport chain in oxidative phosphorylation?
The electron carriers become reduced as they receive an electron and oxidized as they pass it down to their more electronegative neighbor.
Electron carriers get ____ from ____ and pass it along until it finally becomes ____
e- …. NADH … O2
The pathway of electrons is a ______ process.
spontaneous
Electrons ___ in free energy as they go down the chain
drop
At the end of the chain in oxidative phosphorylation, what happens?
the electrons are passed to O2 and form H2O
Chemiosmosis
the use of energy in a H+ gradient to drive cellular work
ATP synthase
H+ moving back across the membrane, passing through the protein complex / uses the exergonic flow of H+ to drive phosphorylation of ADP forming ATP
Electron transfer in the electron transport chain causes proteins to _____
pump H+ from the mitochondrial matrix to the inermembrane space (then ATP synthase happens)
proton-motive force
the H+ gradient
During cellular respiration, most energy flows in the sequence:
glucose -> NADH -> electron transport chain -> proton-motive force -> ATP
How much ATP is made during cellular respiration per glucose molecule?
32 ATP
fermentation
substrate-level phosphorylation instead of the electron transport chain
happens when there is not O2 in conjunction with glycolysis
How much ATP is produced during fermentation per glucose molecule?
2 ATP
Two common types of fermentation:
- alcohol fermentation
2. lactic acid fermentation
alcohol fermentation
pyruvate is converted to ethanol in 2 steps:
- releases CO2
- produces ethanol
lactic acid fermentation
pyruvate is reduced by NADH / end product = lactate / no CO2 / human cells use when O2 is scarce
What are the only elements absolutely needed for energy?
C-H
Proteins are made of
amino acids
Glycolysis accepts a wide range of _____
carbohydrates
The most energy is in ____
lipids
What is necessary for proteins to be used in glycolysis?
The proteins must be broken into amino acids and then the amino groups must be removed.
Fats are digested to _______ and ________
glycerol (glycolysis) and fatty acids (acetyl CoA)
How are fatty acids broken down?
beta oxidation
_______ is the most common mechanism for metabolic control.
Feedback inhibition
If ATP concentration begins to drop, respiration _______
speeds up
Autotrophs
sustain themselves without eating anything derived from other organisms
Autotrophs are the ____ of the biosphere
producers
What does photosynthesis occur in? (4)
- plants
- algae
- other unicellular eukaryotes
- some prokaryotes
Heterotrophs
obtain their organic material from other organisms
Heterotrophs are the ______ of the biosphere.
consumers
If a heterotroph consumes the remains of dead organisms, it is called a _______
decomposer
How does CO2 enter and O2 exit the leaf?
stomata
Where are chloroplasts found?
mainly in the cells of the mesophyll
Where is chlorophyll found?
in the thylakoid membrane
What gives plants their green color?
chlorophyll
Why is photosynthesis the opposite of respiration?
it reverses the direction of electron flow
Photosynthesis is ____
a redox reaction in which H2O is oxidized and CO2 is reduced
What is oxidized in photosynthesis?
H2O
What is reduced in photosynthesis?
CO2
Is photosynthesis endergonic or exergonic?
endergonic -> the energy boost is provided by light
True or false: Photosynthesis consists of light reactions.
True
What are the steps in photosynthesis?
Split H2O
Release O2
Reduce the electron acceptor NADP+ to NADPH
Generate ATP from ADP by photophosphorylation
What does the Calvin cycle do and where is it located?
The Calvin cycle (in the stroma) forms sugar from CO2, using ATP and NADPH
Does the dark reaction happen only at night?
No, it happens all the time; it just does not require the light.
The distance between two peaks of light’s rhythmic waves
wavelengths
the discrete particles in light
photons
Each photon has a ____ quantity of energy.
fixed
Pigments
substances that absorb visible light
Wavelengths that are not absorbed are
reflected or transmitted
Chlorophyll ______ and _______ green light
reflects and transmits
Chlorophyll a
main photosynthetic pigment
Chlorophyll b and carotenoids
broaden the spectrum used for photosynthesis
absorption spectrum
a graph plotting a pigment’s light absorption versus wavelength
action spectrum
profiles the relative effectiveness of different wavelengths of radiation in driving a process
When a pigment absorbs light…
…it goes from a ground state to an unstable excited state
Photons are given off when
an excited electron falls back to ground state (fluorescence)
If illuminated, an isolated solution of chlorophyll will
fluoresce, giving off light and heat.
Photosystems
complexes of chlorophyll and proteins in the thylakoid membrane
light-harvesting complexes
consists of various pigment molecules bound to proteins; transfer the energy of photons to the reaction center
reaction-center complexes
special pair of chlorophyll a in the reaction center uses the energy from light not only to boost one of their electrons to a higher energy level, but also transfer it to a different molecule
primary electron acceptor
in the reaction center accepts excited electrons and is reduced as a result
Light Reaction - Linear Electron Flow
- A photon hits a pigment and its energy is passed among pigment molecules until it excites P680
- An excited electron from P680 is transferred to the primary electron acceptor (we now call is P680)+
- H2O is split by enzymes, and the electrons are transferred from the hydrogen atoms to P680+, thus reducing it to P680 (O2 released)
- Each electron “falls” down an electron transport chain from the primary electron acceptor of PS II to PS I
- Energy released by the fall drives the creation of a proton gradient across the thylakoid membrane
- In PS I, transferred light energy excites P700, which loses an electron to a primary electron acceptor
-P700+ accepts an electron passed down from PS II via
the electron transport chain - Each electron “falls” down an electron transport chain from the primary electron acceptor of PS I to the protein ferredoxin (Fd)
- The electrons are then transferred to NADP+ and reduce it to NADPH
-The electrons of NADPH are available for the reactions of the Calvin cycle- This process also removes an H+ from the stroma
strongest known oxidizing agent
P680+
In a light reaction, what drives ATP synthesis?
diffusion of H+ (protons) across the membrane
What “fills the hole” in PSII?
H2O
What “fills the hole” in PSI?
e-
Chloroplasts and mitochondria generate ATP by _____
chemiosmosis
Mitochondria use _____ for chemiosmosis
food
Chloroplasts use _____ for chemiosmosis
light
In mitochondria, ____ are pumped into the intermembrane space and drive _____ synthesis as they diffuse back into the mitochondrial matrix
protons; ATP
In chloroplasts, ____ are pumped into the thylakoid space and drive ______ synthesis as they diffuse back into the stroma.
protons; ATP
Calvin cycle
- builds sugar from smaller molecules by using ATP and the reducing power of electrons carried by NADPH
- Carbon enters the cycle as CO2 and leaves as a sugar named glyceraldehyde 3-phosphate (needs 3 times cycle)
- for 1G3P cycle, cycle uses 9 ATP and 6 NADPH
How many G3P do you need to make glucose?
2
3 phases of Calvin cycle
- carbon fixation (rubisco)
- reduction
- regeneration of the CO2 acceptor
What best distinguishes living things from non-living?
The ability to produce more of their own kind
Cell cycle
the life of a cell from formation to its own division
Reproducing
when prokarytic cell and unicellular eukaryotic organism divides
Multicellular eukaryotes depend on cell division for
development from a fertilized cell
growth
repair